Strain identifier
BacDive ID: 162122
Type strain: 
Species: Halarcobacter sp.
Strain history: X.-H. Zhang SW026.
NCBI tax ID(s): 2321133 (species)
version 9.2 (current version)
General
@ref: 67770
BacDive-ID: 162122
keywords: 16S sequence, Bacteria, mesophilic
description: Halarcobacter sp. JCM 17856 is a mesophilic bacterium that was isolated from Surface seawater of the South Pacific Ocean.
NCBI tax id
- NCBI tax id: 2321133
- Matching level: species
strain history
- @ref: 67770
- history: X.-H. Zhang SW026.
doi: 10.13145/bacdive162122.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Epsilonproteobacteria
- order: Campylobacterales
- family: Arcobacteraceae
- genus: Halarcobacter
- species: Halarcobacter sp.
- full scientific name: Halarcobacter corrig. Pérez-Cataluña et al. 2019
synonyms
@ref synonym 20215 Haloarcobacter 20215 Malaciobacter 20215 Arcobacter 20215 Pseudarcobacter 20215 Aliarcobacter 20215 Poseidonibacter 20215 Pseudoarcobacter 20215 Malacobacter
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Epsilonproteobacteria
order: Campylobacterales
family: Arcobacteraceae
genus: Halarcobacter
species: Halarcobacter sp.
full scientific name: Halarcobacter sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Surface seawater of the South Pacific Ocean
taxonmaps
- @ref: 69479
- File name: preview.99_43781.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_53;96_9780;97_11786;98_14481;99_43781&stattab=map
- Last taxonomy: Halarcobacter ebronensis subclade
- 16S sequence: JN118550
- Sequence Identity:
- Total samples: 309
- soil counts: 17
- aquatic counts: 250
- animal counts: 33
- plant counts: 9
Sequence information
16S sequences
- @ref: 67770
- description: Arcobacter sp. sw026 16S ribosomal RNA gene, partial sequence
- accession: JN118550
- length: 1426
- database: nuccore
- NCBI tax ID: 1080222
External links
@ref: 67770
culture collection no.: JCM 17856
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |