Strain identifier

BacDive ID: 162045

Type strain: No

Species: Bacteroides fragilis

Strain history: T. Odamaki MBFT 201.

NCBI tax ID(s): 817 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
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General

@ref: 67770

BacDive-ID: 162045

keywords: 16S sequence, Bacteria, mesophilic

description: Bacteroides fragilis JCM 17586 is a mesophilic bacterium that was isolated from Human feces.

NCBI tax id

  • NCBI tax id: 817
  • Matching level: species

strain history

  • @ref: 67770
  • history: T. Odamaki MBFT 201.

doi: 10.13145/bacdive162045.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Bacteroidaceae
  • genus: Bacteroides
  • species: Bacteroides fragilis
  • full scientific name: Bacteroides fragilis (Veillon and Zuber 1898) Castellani and Chalmers 1919 (Approved Lists 1980)
  • synonyms

    • @ref: 20215
    • synonym: Bacillus fragilis

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Bacteroidaceae

genus: Bacteroides

species: Bacteroides fragilis

full scientific name: Bacteroides fragilis (Veillon and Zuber 1898) Castellani and Chalmers 1919

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Human feces

taxonmaps

  • @ref: 69479
  • File name: preview.99_40.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_21;96_34;97_35;98_38;99_40&stattab=map
  • Last taxonomy: Bacteroides fragilis subclade
  • 16S sequence: AB618792
  • Sequence Identity:
  • Total samples: 221995
  • soil counts: 2825
  • aquatic counts: 7159
  • animal counts: 211201
  • plant counts: 810

Sequence information

16S sequences

  • @ref: 67770
  • description: Bacteroides fragilis gene for 16S ribosomal RNA, partial cds, strain: JCM 17586
  • accession: AB618792
  • length: 1490
  • database: ena
  • NCBI tax ID: 817

External links

@ref: 67770

culture collection no.: JCM 17586

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/