General

@ref: 67770

BacDive-ID: 162001

keywords: 16S sequence, Bacteria, mesophilic

description: Nitratireductor aquimarinus JCM 17288 is a mesophilic bacterium that was isolated from Culture of the diatom Skeletonema costatum.

NCBI tax id

• NCBI tax id: 889300
• Matching level: species

strain history

• @ref: 67770
• history: B. C. Cho CL-SC21.

doi: 10.13145/bacdive162001.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Alphaproteobacteria
• order: Hyphomicrobiales
• family: Phyllobacteriaceae
• genus: Nitratireductor
• species: Nitratireductor aquimarinus
• full scientific name: Nitratireductor aquimarinus Jang et al. 2011

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Hyphomicrobiales

family: Phyllobacteriaceae

genus: Nitratireductor

species: Nitratireductor aquimarinus

full scientific name: Nitratireductor aquimarinus Jang et al. 2011

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 37
• range: mesophilic

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: Q-10

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Culture of the diatom Skeletonema costatum
• host species: Skeletonema costatum

taxonmaps

• @ref: 69479
• File name: preview.99_15057.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_5;96_2450;97_4122;98_11388;99_15057&stattab=map
• Last taxonomy: Nitratireductor aquimarinus subclade
• 16S sequence: HQ176467
• Sequence Identity:
• Total samples: 534
• soil counts: 42
• aquatic counts: 210
• animal counts: 143
• plant counts: 139

Sequence information

16S sequences

• @ref: 67770
• description: Nitratireductor aquimarinus CL-SC21 16S ribosomal RNA gene, partial sequence
• accession: HQ176467
• length: 1417
• database: ena
• NCBI tax ID: 889299

GC content

• @ref: 67770
• GC-content: 56.7
• method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 17288, KCCM 90090

literature

• topic: Phylogeny
• Pubmed-ID: 21169459
• title: Nitratireductor aquimarinus sp. nov., isolated from a culture of the diatom Skeletonema costatum, and emended description of the genus Nitratireductor.
• authors: Jang GI, Hwang CY, Cho BC
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.028373-0
• year: 2010
• mesh: Alphaproteobacteria/*classification/genetics/*isolation & purification/metabolism, Base Composition, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Diatoms/*microbiology, Fatty Acids/metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics
• topic2: Metabolism

Reference