Strain identifier

BacDive ID: 161985

Type strain: Yes

Species: Thermoproteus thermophilus

Strain history: J.-W. Bae; Dept. of Biol., Kyung Hee Univ., South Korea; CBA1502.

NCBI tax ID(s): 867916 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 8.1 (current version)

General

@ref: 67770

BacDive-ID: 161985

keywords: 16S sequence, Archaea, hyperthermophilic

description: Thermoproteus thermophilus JCM 17229 is a hyperthermophilic archaeon that was isolated from Solfataric soil in the Mayon volcano.

NCBI tax id

  • NCBI tax id: 867916
  • Matching level: species

strain history

  • @ref: 67770
  • history: J.-W. Bae; Dept. of Biol., Kyung Hee Univ., South Korea; CBA1502.

doi: 10.13145/bacdive161985.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/thermoproteota
  • domain: Archaea
  • phylum: Thermoproteota
  • class: Thermoprotei
  • order: Thermoproteales
  • family: Thermoproteaceae
  • genus: Thermoproteus
  • species: Thermoproteus thermophilus
  • full scientific name: Thermoproteus thermophilus Yim et al. 2015

@ref: 67770

domain: Archaea

phylum: Crenarchaeota

class: Thermoprotei

order: Thermoproteales

family: Thermoproteaceae

genus: Thermoproteus

species: Thermoproteus thermophilus

full scientific name: Thermoproteus thermophilus Yim et al. 2015

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 85
  • range: hyperthermophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Solfataric soil in the Mayon volcano
  • country: Philippines
  • origin.country: PHL
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_188351.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17852;96_69465;97_90227;98_122633;99_188351&stattab=map
  • Last taxonomy: Thermoproteus thermophilus
  • 16S sequence: HM594678
  • Sequence Identity:
  • Total samples: 10
  • aquatic counts: 10

Sequence information

16S sequences

  • @ref: 67770
  • description: Thermoproteus thermophilus strain CBA1502 16S ribosomal RNA gene, partial sequence
  • accession: HM594678
  • length: 1435
  • database: ena
  • NCBI tax ID: 867916

GC content

  • @ref: 67770
  • GC-content: 62
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 17229, ATCC BAA 2416

literature

  • topic: Phylogeny
  • Pubmed-ID: 25933622
  • title: Thermoproteus thermophilus sp. nov., a hyperthermophilic crenarchaeon isolated from solfataric soil.
  • authors: June Yim K, Seon Song H, Choi JS, Woon Roh S
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.000293
  • year: 2015
  • mesh: Base Composition, DNA, Archaeal/genetics, Molecular Sequence Data, Nucleic Acid Hybridization, Philippines, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Thermoproteus/*classification/genetics/isolation & purification
  • topic2: Genetics

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/