Strain identifier
BacDive ID: 161985
Type strain:
Species: Thermoproteus thermophilus
Strain history: J.-W. Bae; Dept. of Biol., Kyung Hee Univ., South Korea; CBA1502.
NCBI tax ID(s): 867916 (species)
General
@ref: 67770
BacDive-ID: 161985
keywords: 16S sequence, Archaea, hyperthermophilic
description: Thermoproteus thermophilus JCM 17229 is a hyperthermophilic archaeon that was isolated from Solfataric soil in the Mayon volcano.
NCBI tax id
- NCBI tax id: 867916
- Matching level: species
strain history
- @ref: 67770
- history: J.-W. Bae; Dept. of Biol., Kyung Hee Univ., South Korea; CBA1502.
doi: 10.13145/bacdive161985.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/thermoproteota
- domain: Archaea
- phylum: Thermoproteota
- class: Thermoprotei
- order: Thermoproteales
- family: Thermoproteaceae
- genus: Thermoproteus
- species: Thermoproteus thermophilus
- full scientific name: Thermoproteus thermophilus Yim et al. 2015
@ref: 67770
domain: Archaea
phylum: Crenarchaeota
class: Thermoprotei
order: Thermoproteales
family: Thermoproteaceae
genus: Thermoproteus
species: Thermoproteus thermophilus
full scientific name: Thermoproteus thermophilus Yim et al. 2015
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 85
- range: hyperthermophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Solfataric soil in the Mayon volcano
- country: Philippines
- origin.country: PHL
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_188351.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17852;96_69465;97_90227;98_122633;99_188351&stattab=map
- Last taxonomy: Thermoproteus thermophilus
- 16S sequence: HM594678
- Sequence Identity:
- Total samples: 10
- aquatic counts: 10
Sequence information
16S sequences
- @ref: 67770
- description: Thermoproteus thermophilus strain CBA1502 16S ribosomal RNA gene, partial sequence
- accession: HM594678
- length: 1435
- database: ena
- NCBI tax ID: 867916
GC content
- @ref: 67770
- GC-content: 62
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 17229, ATCC BAA 2416
literature
- topic: Phylogeny
- Pubmed-ID: 25933622
- title: Thermoproteus thermophilus sp. nov., a hyperthermophilic crenarchaeon isolated from solfataric soil.
- authors: June Yim K, Seon Song H, Choi JS, Woon Roh S
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.000293
- year: 2015
- mesh: Base Composition, DNA, Archaeal/genetics, Molecular Sequence Data, Nucleic Acid Hybridization, Philippines, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Thermoproteus/*classification/genetics/isolation & purification
- topic2: Genetics
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |