Strain identifier
BacDive ID: 161930
Type strain:
Species: Halorubrum salinum
Strain history: H.-L. Cui; Jiangsu Univ., China; GX71.
NCBI tax ID(s): 767517 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161930
keywords: 16S sequence, Archaea, mesophilic
description: Halorubrum salinum JCM 17093 is a mesophilic archaeon that was isolated from Gangxi marine solar saltern near the Weihai City.
NCBI tax id
- NCBI tax id: 767517
- Matching level: species
strain history
- @ref: 67770
- history: H.-L. Cui; Jiangsu Univ., China; GX71.
doi: 10.13145/bacdive161930.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Halobacteria
- order: Haloferacales
- family: Halorubraceae
- genus: Halorubrum
- species: Halorubrum salinum
- full scientific name: Halorubrum salinum Zhang and Cui 2014
@ref: 67770
domain: Archaea
phylum: Euryarchaeota
class: Halobacteria
order: Haloferacales
family: Halorubraceae
genus: Halorubrum
species: Halorubrum salinum
full scientific name: Halorubrum salinum Zhang and Cui 2014
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Gangxi marine solar saltern near the Weihai City
- geographic location: Shandong Province
- country: China
- origin.country: CHN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_187716.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17655;96_68889;97_89858;98_122183;99_187716&stattab=map
- Last taxonomy: Halorubrum salinum
- 16S sequence: HM063951
- Sequence Identity:
- Total samples: 4
- aquatic counts: 4
Sequence information
16S sequences
- @ref: 67770
- description: Halorubrum salinum strain GX71 16S ribosomal RNA gene, partial sequence
- accession: HM063951
- length: 1470
- database: ena
- NCBI tax ID: 767517
GC content
- @ref: 67770
- GC-content: 67.1
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 17093, CGMCC 1.10458
literature
- topic: Phylogeny
- Pubmed-ID: 24643450
- title: Halorubrum salinum sp. nov., isolated from a marine solar saltern.
- authors: Zhang WJ, Cui HL
- journal: Arch Microbiol
- DOI: 10.1007/s00203-014-0975-1
- year: 2014
- mesh: Anti-Bacterial Agents/pharmacology, China, Halorubrum/chemistry/*classification/drug effects/isolation & purification/*physiology, Hydrogen-Ion Concentration, Lipids/analysis, Molecular Sequence Data, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sodium Chloride/metabolism, Species Specificity
- topic2: Genetics
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |