Strain identifier

BacDive ID: 161833

Type strain: No

Species: Mucilaginibacter sp.

Strain history: B.-C. Kim DR-f3.

NCBI tax ID(s): 1882438 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 161833

keywords: 16S sequence, Bacteria, mesophilic

description: Mucilaginibacter sp. JCM 16602 is a mesophilic bacterium that was isolated from Rhizosphere of Platycodon grandifloras.

NCBI tax id

  • NCBI tax id: 1882438
  • Matching level: species

strain history

  • @ref: 67770
  • history: B.-C. Kim DR-f3.

doi: 10.13145/bacdive161833.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Sphingobacteriia
  • order: Sphingobacteriales
  • family: Sphingobacteriaceae
  • genus: Mucilaginibacter
  • species: Mucilaginibacter sp.
  • full scientific name: Mucilaginibacter Pankratov et al. 2007

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Sphingobacteriia

order: Sphingobacteriales

family: Sphingobacteriaceae

genus: Mucilaginibacter

species: Mucilaginibacter sp.

full scientific name: Mucilaginibacter sp.

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 25

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Rhizosphere of Platycodon grandifloras
  • host species: Platycodon grandifloras
  • geographic location: Daejeon
  • country: Republic of Korea
  • origin.country: KOR
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_181627.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_115;96_2555;97_8935;98_10955;99_181627&stattab=map
  • Last taxonomy: Mucilaginibacter
  • 16S sequence: GU139696
  • Sequence Identity:
  • Total samples: 693
  • soil counts: 430
  • aquatic counts: 62
  • animal counts: 180
  • plant counts: 21

Sequence information

16S sequences

  • @ref: 67770
  • description: Mucilaginibacter sp. DR-f3 16S ribosomal RNA gene, partial sequence
  • accession: GU139696
  • length: 1443
  • database: nuccore
  • NCBI tax ID: 692993

External links

@ref: 67770

culture collection no.: JCM 16602

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/