Strain identifier
BacDive ID: 161824
Type strain:
Species: Escherichia coli
Strain history: M. Hattori SE15 <-- K. Itoh No. 79.
NCBI tax ID(s): 562 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161824
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Escherichia coli JCM 16575 is a mesophilic bacterium that was isolated from Feces of healthy adult.
NCBI tax id
- NCBI tax id: 562
- Matching level: species
strain history
- @ref: 67770
- history: M. Hattori SE15 <-- K. Itoh No. 79.
doi: 10.13145/bacdive161824.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Escherichia
- species: Escherichia coli
- full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacillus coli
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Escherichia
species: Escherichia coli
full scientific name: Escherichia coli (Migula 1895) Castellani and Chalmers 1919
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Feces of healthy adult
taxonmaps
- @ref: 69479
- File name: preview.99_8.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_6;96_7;97_7;98_7;99_8&stattab=map
- Last taxonomy: Enterobacteriaceae
- 16S sequence: LC508805
- Sequence Identity:
- Total samples: 97630
- soil counts: 2111
- aquatic counts: 5613
- animal counts: 88071
- plant counts: 1835
Sequence information
16S sequences
- @ref: 67770
- description: Escherichia coli JCM 16575 gene for 16S ribosomal RNA, partial sequence
- accession: LC508805
- length: 1464
- database: ena
- NCBI tax ID: 562
Genome sequences
- @ref: 67770
- description: Escherichia coli SE15
- accession: GCA_000010485
- assembly level: complete
- database: ncbi
- NCBI tax ID: 431946
External links
@ref: 67770
culture collection no.: JCM 16575
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |