General

@ref: 67770

BacDive-ID: 161767

keywords: 16S sequence, Bacteria, mesophilic

description: Paenibacillus wooponensis JCM 16350 is a mesophilic bacterium that was isolated from Fresh water sample collected from Woopo wetland.

NCBI tax id

• NCBI tax id: 554310
• Matching level: species

strain history

• @ref: 67770
• history: C. N. Seong WPCB018.

doi: 10.13145/bacdive161767.20241212.9.2

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Bacilli
• order: Caryophanales
• family: Paenibacillaceae
• genus: Paenibacillus
• species: Paenibacillus wooponensis
• full scientific name: Paenibacillus wooponensis Baik et al. 2011

@ref: 67770

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Caryophanales

family: Paenibacillaceae

genus: Paenibacillus

species: Paenibacillus wooponensis

full scientific name: Paenibacillus wooponensis Baik et al. 2011

type strain: yes

Culture and growth conditions

culture temp

• @ref: 67770
• growth: positive
• type: growth
• temperature: 30

Physiology and metabolism

observation

• @ref: 67770
• observation: quinones: MK-7

Isolation, sampling and environmental information

isolation

• @ref: 67770
• sample type: Fresh water sample collected from Woopo wetland
• country: Republic of Korea
• origin.country: KOR
• continent: Asia

taxonmaps

• @ref: 69479
• File name: preview.99_171916.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15358;96_893;97_39237;98_51047;99_171916&stattab=map
• Last taxonomy: Paenibacillus wooponensis subclade
• 16S sequence: EU939687
• Sequence Identity:
• Total samples: 405
• soil counts: 150
• aquatic counts: 87
• animal counts: 115
• plant counts: 53

Sequence information

16S sequences

• @ref: 67770
• description: Paenibacillus wooponensis strain WPCB018 16S ribosomal RNA gene, partial sequence
• accession: EU939687
• length: 1432
• database: nuccore
• NCBI tax ID: 554310

GC content

• @ref: 67770
• GC-content: 56
• method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 16350, KCTC 13280

literature

• topic: Phylogeny
• Pubmed-ID: 21216920
• title: Paenibacillus wooponensis sp. nov., isolated from wetland freshwater.
• authors: Baik KS, Choe HN, Park SC, Kim EM, Seong CN
• journal: Int J Syst Evol Microbiol
• DOI: 10.1099/ijs.0.028308-0
• year: 2011
• mesh: Base Composition, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, Fatty Acids/metabolism, Fresh Water/*microbiology, Molecular Sequence Data, Paenibacillus/*classification/genetics/*isolation & purification/metabolism, Phylogeny, RNA, Ribosomal, 16S/genetics, Wetlands
• topic2: Metabolism

Reference