Strain identifier
BacDive ID: 161632
Type strain:
Species: Acetobacter okinawensis
Strain history: T. Uchimura 1-34.
NCBI tax ID(s): 1076594 (species)
version 9.2 (current version)
General
@ref: 67770
BacDive-ID: 161632
keywords: 16S sequence, Bacteria, mesophilic
description: Acetobacter okinawensis JCM 15829 is a mesophilic bacterium that was isolated from Sugarcane in Okinawa,.
NCBI tax id
- NCBI tax id: 1076594
- Matching level: species
strain history
- @ref: 67770
- history: T. Uchimura 1-34.
doi: 10.13145/bacdive161632.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Rhodospirillales
- family: Acetobacteraceae
- genus: Acetobacter
- species: Acetobacter okinawensis
- full scientific name: Acetobacter okinawensis Iino et al. 2013
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhodospirillales
family: Acetobacteraceae
genus: Acetobacter
species: Acetobacter okinawensis
full scientific name: Acetobacter okinawensis Iino et al. 2013
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: Q-9
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Sugarcane (stem) (Saccharum offcinarum) in Okinawa,(2004)
- host species: Saccharum offcinarum
- sampling date: 2004
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_1246.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_29;96_152;97_163;98_985;99_1246&stattab=map
- Last taxonomy: Acetobacter
- 16S sequence: AB665065
- Sequence Identity:
- Total samples: 3246
- soil counts: 352
- aquatic counts: 428
- animal counts: 2157
- plant counts: 309
Sequence information
16S sequences
- @ref: 67770
- description: Acetobacter okinawensis gene for 16S rRNA, partial sequence
- accession: AB665065
- length: 1410
- database: nuccore
- NCBI tax ID: 1076594
GC content
- @ref: 67770
- GC-content: 59.3
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 15829
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |