Strain identifier
BacDive ID: 161630
Type strain:
Species: Metallosphaera cuprina
Strain history: C.-Y. Jiang Ar-4.
NCBI tax ID(s): 1006005 (species)
version 9.2 (current version)
General
@ref: 67770
BacDive-ID: 161630
keywords: genome sequence, 16S sequence, Archaea, thermophilic
description: Metallosphaera cuprina JCM 15769 is a thermophilic archaeon that was isolated from Sulfuric hot spring.
NCBI tax id
- NCBI tax id: 1006005
- Matching level: species
strain history
- @ref: 67770
- history: C.-Y. Jiang Ar-4.
doi: 10.13145/bacdive161630.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/thermoproteota
- domain: Archaea
- phylum: Thermoproteota
- class: Thermoprotei
- order: Sulfolobales
- family: Sulfolobaceae
- genus: Metallosphaera
- species: Metallosphaera cuprina
- full scientific name: Metallosphaera cuprina Liu et al. 2011
@ref: 67770
domain: Archaea
phylum: Crenarchaeota
class: Thermoprotei
order: Sulfolobales
family: Sulfolobaceae
genus: Metallosphaera
species: Metallosphaera cuprina
full scientific name: Metallosphaera cuprina Liu et al. 2011
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 65
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Sulfuric hot spring
- geographic location: Tengchong, Yunnan Province
- country: China
- origin.country: CHN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_187334.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17817;96_68846;97_89590;98_121883;99_187334&stattab=map
- Last taxonomy: Metallosphaera cuprina subclade
- 16S sequence: FN796482
- Sequence Identity:
- Total samples: 5
- aquatic counts: 4
- animal counts: 1
Sequence information
16S sequences
- @ref: 67770
- description: Metallosphaera cuprina Ar-4 partial 16S rRNA gene, type strain Ar-4T
- accession: FN796482
- length: 1430
- database: nuccore
- NCBI tax ID: 1006006
Genome sequences
- @ref: 67770
- description: Metallosphaera cuprina Ar-4
- accession: GCA_000204925
- assembly level: complete
- database: ncbi
- NCBI tax ID: 1006006
GC content
- @ref: 67770
- GC-content: 40.2
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 67770
culture collection no.: JCM 15769, CGMCC 1.7082
literature
- topic: Phylogeny
- Pubmed-ID: 21057050
- title: Metallosphaera cuprina sp. nov., an acidothermophilic, metal-mobilizing archaeon.
- authors: Liu LJ, You XY, Guo X, Liu SJ, Jiang CY
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.026591-0
- year: 2010
- mesh: Aerobiosis, Base Composition, Carboxylic Acids/*metabolism, Chemoautotrophic Growth, China, Cluster Analysis, DNA, Archaeal/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Flagella/physiology, Hot Springs/*microbiology, Hydrogen-Ion Concentration, Lipids/analysis, Locomotion, Metals/*metabolism, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidation-Reduction, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sulfolobaceae/*classification/genetics/*isolation & purification/physiology, Sulfur Compounds/metabolism, Temperature
- topic2: Metabolism
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |