Strain identifier

BacDive ID: 161630

Type strain: Yes

Species: Metallosphaera cuprina

Strain history: C.-Y. Jiang Ar-4.

NCBI tax ID(s): 1006005 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 161630

keywords: genome sequence, 16S sequence, Archaea, thermophilic

description: Metallosphaera cuprina JCM 15769 is a thermophilic archaeon that was isolated from Sulfuric hot spring.

NCBI tax id

  • NCBI tax id: 1006005
  • Matching level: species

strain history

  • @ref: 67770
  • history: C.-Y. Jiang Ar-4.

doi: 10.13145/bacdive161630.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/thermoproteota
  • domain: Archaea
  • phylum: Thermoproteota
  • class: Thermoprotei
  • order: Sulfolobales
  • family: Sulfolobaceae
  • genus: Metallosphaera
  • species: Metallosphaera cuprina
  • full scientific name: Metallosphaera cuprina Liu et al. 2011

@ref: 67770

domain: Archaea

phylum: Crenarchaeota

class: Thermoprotei

order: Sulfolobales

family: Sulfolobaceae

genus: Metallosphaera

species: Metallosphaera cuprina

full scientific name: Metallosphaera cuprina Liu et al. 2011

type strain: yes

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 65

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Sulfuric hot spring
  • geographic location: Tengchong, Yunnan Province
  • country: China
  • origin.country: CHN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_187334.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_17817;96_68846;97_89590;98_121883;99_187334&stattab=map
  • Last taxonomy: Metallosphaera cuprina subclade
  • 16S sequence: FN796482
  • Sequence Identity:
  • Total samples: 5
  • aquatic counts: 4
  • animal counts: 1

Sequence information

16S sequences

  • @ref: 67770
  • description: Metallosphaera cuprina Ar-4 partial 16S rRNA gene, type strain Ar-4T
  • accession: FN796482
  • length: 1430
  • database: nuccore
  • NCBI tax ID: 1006006

Genome sequences

  • @ref: 67770
  • description: Metallosphaera cuprina Ar-4
  • accession: GCA_000204925
  • assembly level: complete
  • database: ncbi
  • NCBI tax ID: 1006006

GC content

  • @ref: 67770
  • GC-content: 40.2
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 67770

culture collection no.: JCM 15769, CGMCC 1.7082

literature

  • topic: Phylogeny
  • Pubmed-ID: 21057050
  • title: Metallosphaera cuprina sp. nov., an acidothermophilic, metal-mobilizing archaeon.
  • authors: Liu LJ, You XY, Guo X, Liu SJ, Jiang CY
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.026591-0
  • year: 2010
  • mesh: Aerobiosis, Base Composition, Carboxylic Acids/*metabolism, Chemoautotrophic Growth, China, Cluster Analysis, DNA, Archaeal/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Flagella/physiology, Hot Springs/*microbiology, Hydrogen-Ion Concentration, Lipids/analysis, Locomotion, Metals/*metabolism, Molecular Sequence Data, Nucleic Acid Hybridization, Oxidation-Reduction, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sulfolobaceae/*classification/genetics/*isolation & purification/physiology, Sulfur Compounds/metabolism, Temperature
  • topic2: Metabolism

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/