Strain identifier
BacDive ID: 161597
Type strain: 
Species: Sphingomonas sp.
Strain history: J. Chun JC2489.
NCBI tax ID(s): 28214 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161597
keywords: 16S sequence, Bacteria, psychrophilic
description: Sphingomonas sp. JCM 15505 is a psychrophilic bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 28214
- Matching level: species
strain history
- @ref: 67770
- history: J. Chun JC2489.
doi: 10.13145/bacdive161597.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Sphingomonadales
- family: Sphingomonadaceae
- genus: Sphingomonas
- species: Sphingomonas sp.
- full scientific name: Sphingomonas Yabuuchi et al. 1990
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Sphingomonadales
family: Sphingomonadaceae
genus: Sphingomonas
species: Sphingomonas sp.
full scientific name: Sphingomonas sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 10
- range: psychrophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
- country: Antarctica
- origin.country: ATA
- continent: Antarctica
taxonmaps
- @ref: 69479
- File name: preview.99_102517.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_20;96_18630;97_23049;98_69926;99_102517&stattab=map
- Last taxonomy: Sphingomonadaceae
- 16S sequence: EU642849
- Sequence Identity:
- Total samples: 4071
- soil counts: 1226
- aquatic counts: 811
- animal counts: 947
- plant counts: 1087
Sequence information
16S sequences
- @ref: 67770
- description: Sphingomonas sp. JC2489 16S ribosomal RNA gene, partial sequence
- accession: EU642849
- length: 1387
- database: ena
- NCBI tax ID: 524289
External links
@ref: 67770
culture collection no.: JCM 15505
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |