Strain identifier
BacDive ID: 161521
Type strain: 
Species: Kosakonia cowanii
Strain history: K. Minamisawa B43 (Klebsiella sp.).
NCBI tax ID(s): 208223 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161521
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Kosakonia cowanii JCM 14683 is a mesophilic bacterium that was isolated from Seed of wild rice Bu-24.
NCBI tax id
- NCBI tax id: 208223
- Matching level: species
strain history
- @ref: 67770
- history: K. Minamisawa B43 (Klebsiella sp.).
doi: 10.13145/bacdive161521.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Enterobacteriaceae
- genus: Kosakonia
- species: Kosakonia cowanii
- full scientific name: Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013
synonyms
- @ref: 20215
- synonym: Enterobacter cowanii
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacterales
family: Enterobacteriaceae
genus: Kosakonia
species: Kosakonia cowanii
full scientific name: Kosakonia cowanii (Inoue et al. 2001) Brady et al. 2013
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Seed of wild rice (Oryza sativa) Bu-24
- host species: Oryza sativa
taxonmaps
- @ref: 69479
- File name: preview.99_3894.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_6;96_7;97_7;98_88;99_3894&stattab=map
- Last taxonomy: Enterobacteriaceae
- 16S sequence: LC508795
- Sequence Identity:
- Total samples: 253
- soil counts: 10
- aquatic counts: 6
- animal counts: 232
- plant counts: 5
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 67770 | Klebsiella cf. planticola B43 gene for 16S ribosomal RNA | AB027695 | 690 | ena | 95610 |
| 67770 | Klebsiella sp. JCM 14683 gene for 16S ribosomal RNA, partial sequence | LC508795 | 1464 | ena | 576 |
Genome sequences
- @ref: 67770
- description: Klebsiella cf. planticola B43
- accession: GCA_000333535
- assembly level: scaffold
- database: ncbi
- NCBI tax ID: 95610
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 92.275 | no |
| flagellated | no | 68.896 | no |
| gram-positive | no | 97.816 | no |
| anaerobic | no | 94.563 | no |
| aerobic | yes | 53.345 | no |
| halophile | no | 86.697 | no |
| spore-forming | no | 92.333 | no |
| thermophile | no | 99.38 | yes |
| glucose-util | yes | 95.074 | no |
| glucose-ferment | yes | 84.866 | no |
External links
@ref: 67770
culture collection no.: JCM 14683
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |