Strain identifier

BacDive ID: 161508

Type strain: No

Species: Bacteroides propionicifaciens

Strain history: A. Ueki S562.

NCBI tax ID(s): 392838 (species)

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General

@ref: 67770

BacDive-ID: 161508

keywords: 16S sequence, Bacteria, mesophilic

description: Bacteroides propionicifaciens JCM 14650 is a mesophilic bacterium that was isolated from Rice-straw residue from a methanogenic reactor treating waste from cattle farms in Betsukai-machi.

NCBI tax id

  • NCBI tax id: 392838
  • Matching level: species

strain history

  • @ref: 67770
  • history: A. Ueki S562.

doi: 10.13145/bacdive161508.20241212.9.2

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Bacteroidaceae
  • genus: Bacteroides
  • species: Bacteroides propionicifaciens
  • full scientific name: Bacteroides propionicifaciens Ueki et al. 2008

@ref: 67770

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Bacteroidaceae

genus: Bacteroides

species: Bacteroides propionicifaciens

full scientific name: Bacteroides propionicifaciens Ueki et al. 2008

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 30

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-8, MK-9

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Rice-straw residue from a methanogenic reactor treating waste from cattle farms in Betsukai-machi
  • geographic location: Hokkaido
  • country: Japan
  • origin.country: JPN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_4200.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15892;96_2124;97_2559;98_3170;99_4200&stattab=map
  • Last taxonomy: Bacteroides propionicifaciens subclade
  • 16S sequence: AB542765
  • Sequence Identity:
  • Total samples: 12248
  • soil counts: 269
  • aquatic counts: 288
  • animal counts: 11553
  • plant counts: 138

Sequence information

16S sequences

  • @ref: 67770
  • description: Bacteroides propionicifaciens gene for 16S ribosomal RNA, partial sequence, strain: JCM 14650
  • accession: AB542765
  • length: 1491
  • database: nuccore
  • NCBI tax ID: 392838

GC content

  • @ref: 67770
  • GC-content: 46.2-47.5
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 14650

straininfo link

  • @ref: 113451
  • straininfo: 343874

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
113451Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID343874.1