Strain identifier
BacDive ID: 161438
Type strain:
Species: Shewanella algae
Strain history: K. Komagata <-- R. Hugh 2687 <-- R. Sakazaki.
NCBI tax ID(s): 38313 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 161438
keywords: 16S sequence, Bacteria, mesophilic
description: Shewanella algae JCM 13989 is a mesophilic bacterium that was isolated from Snake feces.
NCBI tax id
- NCBI tax id: 38313
- Matching level: species
strain history
- @ref: 67770
- history: K. Komagata <-- R. Hugh 2687 <-- R. Sakazaki.
doi: 10.13145/bacdive161438.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Alteromonadales
- family: Shewanellaceae
- genus: Shewanella
- species: Shewanella algae
- full scientific name: Shewanella algae corrig. Simidu et al. 1990
synonyms
@ref synonym 20215 Shewanella haliotis 20215 Shewanella alga 20215 Shewanella upenei
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Alteromonadales
family: Shewanellaceae
genus: Shewanella
species: Shewanella algae
full scientific name: Shewanella algae Simidu et al. 1990
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Snake feces
taxonmaps
- @ref: 69479
- File name: preview.99_1099.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_59;96_641;97_744;98_863;99_1099&stattab=map
- Last taxonomy: Shewanella algae
- 16S sequence: LC508015
- Sequence Identity:
- Total samples: 4840
- soil counts: 118
- aquatic counts: 730
- animal counts: 3902
- plant counts: 90
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
67770 | Shewanella algae gene for 16S rRNA, partial sequence, strain: Hugh2687 | AB247217 | 525 | ena | 38313 |
67770 | Shewanella algae JCM 13989 gene for 16S rRNA, partial sequence | LC508015 | 1467 | ena | 38313 |
External links
@ref: 67770
culture collection no.: JCM 13989
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |