Strain identifier
BacDive ID: 16140
Type strain:
Species: Streptomyces abikoensis
Strain Designation: BA-3572
Strain history: KCC S-0694 <-- IPV 1972 <-- ISP 5473 <-- Chas. Pfizer & Co.; BA 3572.
NCBI tax ID(s): 68252 (species)
General
@ref: 9567
BacDive-ID: 16140
DSM-Number: 40473
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces abikoensis BA-3572 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 68252
- Matching level: species
strain history
@ref | history |
---|---|
9567 | <- E.B. Shirling, ISP <- J. Routien, Chas. Pfizer & Co., BA-3572 |
67770 | KCC S-0694 <-- IPV 1972 <-- ISP 5473 <-- Chas. Pfizer & Co.; BA 3572. |
doi: 10.13145/bacdive16140.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces abikoensis
- full scientific name: Streptomyces abikoensis (Umezawa et al. 1951) Witt and Stackebrandt 1991
synonyms
@ref synonym 20215 Streptoverticillium luteoverticillatum 20215 Streptomyces olivoreticuli 20215 Streptoverticillium olivoreticulum subsp. cellulophilum 20215 Streptomyces abikoensum 20215 Streptomyces abikoensis 20215 Streptomyces luteoverticillatus 20215 Streptomyces parvisporogenes 20215 Streptoverticillium abikoense 20215 Streptoverticillium olivoreticuli 20215 Streptoverticillium parvisporogenum 20215 Streptoverticillium olivoreticuli subsp. cellulophilum 20215 Streptoverticillium ehimense 20215 Streptoverticillium parvisporogenes 20215 Streptoverticillium olivoreticulum 20215 Streptomyces ehimensis 20215 Streptomyces ekimensis
@ref: 9567
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces abikoensis
full scientific name: Streptomyces abikoensis (Umezawa et al. 1951) Witt and Stackebrandt 1991
strain designation: BA-3572
type strain: no
Morphology
multimedia
- @ref: 9567
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40473.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
9567 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
9567 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
9567 | positive | growth | 28 | mesophilic |
67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
compound production
@ref | compound |
---|---|
9567 | antibiotic PA 150 |
67770 | Antibiotic PA-150 |
Isolation, sampling and environmental information
isolation
- @ref: 9567
- sample type: soil
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 9567
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Streptomyces parvisporogenes gene for 16S rRNA, partial sequence, strain: NBRC 13394 | AB184375 | 1465 | ena | 68252 |
20218 | Streptomyces abikoensis gene for 16S rRNA, partial sequence, strain: NBRC 13907 | AB249913 | 1448 | ena | 97398 |
20218 | Streptomyces parvisporogenes strain IFO 13907 16S ribosomal RNA gene, partial sequence | AY999865 | 1419 | ena | 68252 |
67770 | Streptomyces parvisporogenes 16S rRNA gene, type strain LMG 20072 | AJ781348 | 1476 | ena | 68252 |
External links
@ref: 9567
culture collection no.: DSM 40473, ATCC 12568, CBS 695.72, IFO 13394, IFO 13907, ISP 5473, KCC S-0694, KCC S-0812, NBRC 13394, NBRC 13907, RIA 1355, JCM 4694, BCRC 16218, CGMCC 4.1744, JCM 4812, KCTC 19964, NRRL B-12386, NRRL B-5464, VKM Ac-878
straininfo link
- @ref: 85205
- straininfo: 38560
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
9567 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40473) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-40473 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
85205 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID38560.1 | StrainInfo: A central database for resolving microbial strain identifiers |