Strain identifier

BacDive ID: 16140

Type strain: No

Species: Streptomyces abikoensis

Strain Designation: BA-3572

Strain history: KCC S-0694 <-- IPV 1972 <-- ISP 5473 <-- Chas. Pfizer & Co.; BA 3572.

NCBI tax ID(s): 3075519 (species), 68252 (species)

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General

@ref: 9567

BacDive-ID: 16140

DSM-Number: 40473

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces abikoensis BA-3572 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

NCBI tax idMatching level
3075519species
68252species

strain history

@refhistory
9567<- E.B. Shirling, ISP <- J. Routien, Chas. Pfizer & Co., BA-3572
67770KCC S-0694 <-- IPV 1972 <-- ISP 5473 <-- Chas. Pfizer & Co.; BA 3572.

doi: 10.13145/bacdive16140.20250331.9.3

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces abikoensis
  • full scientific name: Streptomyces abikoensis (Umezawa et al. 1951) Witt and Stackebrandt 1991

  • synonyms

    @refsynonym
    20215Streptomyces hesseae
    20215Streptomyces olivoreticuli
    20215Streptomyces parvisporogenes
    20215Streptoverticillium parvisporogenum
    20215Streptoverticillium olivoreticuli
    20215Streptoverticillium ehimense
    20215Streptoverticillium parvisporogenes
    20215Streptoverticillium olivoreticulum subsp. cellulophilum
    20215Streptomyces luteoverticillatus
    20215Streptomyces ekimensis
    20215Streptomyces ehimensis
    20215Streptoverticillium luteoverticillatum
    20215Streptomyces abikoensis
    20215Streptomyces abikoensum
    20215Streptoverticillium olivoreticulum
    20215Streptoverticillium abikoense
    20215Streptoverticillium olivoreticuli subsp. cellulophilum

@ref: 9567

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces abikoensis

full scientific name: Streptomyces abikoensis (Umezawa et al. 1951) Witt and Stackebrandt 1991

strain designation: BA-3572

type strain: no

Morphology

multimedia

  • @ref: 9567
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40473.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9567GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9567ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf

culture temp

@refgrowthtypetemperature
9567positivegrowth28
67770positivegrowth28

Physiology and metabolism

compound production

@refcompound
9567antibiotic PA 150
67770Antibiotic PA-150

Isolation, sampling and environmental information

isolation

  • @ref: 9567
  • sample type: soil

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 9567
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces parvisporogenes gene for 16S rRNA, partial sequence, strain: NBRC 13394AB1843751465nuccore68252
20218Streptomyces abikoensis gene for 16S rRNA, partial sequence, strain: NBRC 13907AB2499131448nuccore97398
20218Streptomyces parvisporogenes strain IFO 13907 16S ribosomal RNA gene, partial sequenceAY9998651419nuccore68252
67770Streptomyces parvisporogenes 16S rRNA gene, type strain LMG 20072AJ7813481476nuccore68252
124043Streptomyces parvisporogenes gene for 16S ribosomal RNA, partial sequence, strain: JCM 4694.D44302120nuccore68252

External links

@ref: 9567

culture collection no.: DSM 40473, ATCC 12568, CBS 695.72, IFO 13394, IFO 13907, ISP 5473, KCC S-0694, KCC S-0812, NBRC 13394, NBRC 13907, RIA 1355, JCM 4694, BCRC 16218, CGMCC 4.1744, JCM 4812, KCTC 19964, NRRL B-12386, NRRL B-5464, VKM Ac-878

straininfo link

  • @ref: 85205
  • straininfo: 38560

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9567Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40473)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40473
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
85205Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID38560.1StrainInfo: A central database for resolving microbial strain identifiers
124043Isabel Schober, Julia KoblitzData extracted from sequence databases, automatically matched based on designation and taxonomy