Strain identifier
BacDive ID: 161393
Type strain: 
Species: Nocardioides simplex
Strain history: IAM 1413 <-- H. Iizuka and K. Komagata K-9.
NCBI tax ID(s): 2045 (species)
version 8 (current version)
General
@ref: 67770
BacDive-ID: 161393
keywords: 16S sequence, Bacteria, mesophilic
description: Nocardioides simplex JCM 1367 is a mesophilic bacterium that was isolated from Soil of petroleum zone.
NCBI tax id
- NCBI tax id: 2045
- Matching level: species
strain history
- @ref: 67770
- history: IAM 1413 <-- H. Iizuka and K. Komagata K-9.
doi: 10.13145/bacdive161393.20230509.8
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Propionibacteriales
- family: Nocardioidaceae
- genus: Nocardioides
- species: Nocardioides simplex
- full scientific name: Nocardioides simplex (Jensen 1934) O'Donnell et al. 1983
synonyms
@ref synonym 20215 Arthrobacter simplex 20215 Corynebacterium simplex 20215 Pimelobacter simplex
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Propionibacteriales
family: Nocardioidaceae
genus: Nocardioides
species: Nocardioides simplex
full scientific name: Nocardioides simplex (Jensen 1934) O'Donnell et al. 1983
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil of petroleum zone
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_6659.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_142;96_452;97_518;98_4911;99_6659&stattab=map
- Last taxonomy: Pimelobacter simplex
- 16S sequence: AF005011
- Sequence Identity:
- Total samples: 374
- soil counts: 197
- aquatic counts: 68
- animal counts: 61
- plant counts: 48
Sequence information
16S sequences
- @ref: 67770
- description: Nocardioides simplex 16S ribosomal RNA gene, partial sequence
- accession: AF005011
- length: 1474
- database: ena
- NCBI tax ID: 2045
GC content
| @ref | GC-content | method |
|---|---|---|
| 67770 | 70.5 | thermal denaturation, midpoint method (Tm) |
| 67770 | 72 | thermal denaturation, midpoint method (Tm) |
External links
@ref: 67770
culture collection no.: JCM 1367, IAM 1413, KCTC 9622
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |