Strain identifier

BacDive ID: 16139

Type strain: No

Species: Streptomyces abikoensis

Strain history: KCC S-0081 <-- H. Yonehara <-- S. A. Waksman 3631.

NCBI tax ID(s): 97398 (species)

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General

@ref: 9560

BacDive-ID: 16139

DSM-Number: 40464

keywords: 16S sequence, Bacteria, mesophilic

description: Streptomyces abikoensis DSM 40464 is a mesophilic bacterium of the family Streptomycetaceae.

NCBI tax id

  • NCBI tax id: 97398
  • Matching level: species

strain history

@refhistory
9560<- E.B. Shirling, ISP (Streptoverticillium rubrireticuli) <- S.A. Waksman, IMRU
67770KCC S-0081 <-- H. Yonehara <-- S. A. Waksman 3631.

doi: 10.13145/bacdive16139.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces abikoensis
  • full scientific name: Streptomyces abikoensis corrig. Umezawa et al. 1951

  • synonyms

    @refsynonym
    20215Streptoverticillium luteoverticillatum
    20215Streptomyces olivoreticuli
    20215Streptoverticillium olivoreticulum subsp. cellulophilum
    20215Streptomyces abikoensum
    20215Streptomyces abikoensis
    20215Streptomyces luteoverticillatus
    20215Streptomyces parvisporogenes
    20215Streptoverticillium abikoense
    20215Streptoverticillium olivoreticuli
    20215Streptoverticillium parvisporogenum
    20215Streptoverticillium olivoreticuli subsp. cellulophilum
    20215Streptoverticillium ehimense
    20215Streptoverticillium parvisporogenes
    20215Streptoverticillium olivoreticulum
    20215Streptomyces ehimensis
    20215Streptomyces ekimensis

@ref: 9560

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces abikoensis

full scientific name: Streptomyces abikoensis (Umezawa et al. 1951) Witt and Stackebrandt 1991

type strain: no

Morphology

multimedia

  • @ref: 9560
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_40464.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9560GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9560ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium84.pdf

culture temp

@refgrowthtypetemperaturerange
9560positivegrowth28mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

compound production

@refcompound
9560antibiotic F-20
20216Antibiotic F-20

Safety information

risk assessment

  • @ref: 9560
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces sp. JCM 4081 gene for 16S rRNA, partial sequenceAB018204120ena83379
67770Streptomyces ehimensis gene for 16S rRNA, partial sequence, strain: NBRC 3417AB1847701474ena68195

External links

@ref: 9560

culture collection no.: DSM 40464, ATCC 12629, ATCC 25494, CBS 373.58, CBS 954.69, ETH 28538, IFO 13082, IMET 43339, IMRU 3631, IPV 1725, IPV 2012, ISP 5464, JCM 4081, JCM 4514, JCM 4548, NBRC 13082, NRRL B-1707, RIA 1274, BCRC 12665, IFO 3417, NBRC 3417

straininfo link

  • @ref: 85204
  • straininfo: 35619

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9560Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40464)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40464
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20216Curators of the HKIhttp://www.leibniz-hki.de/de/Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI)
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
85204Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID35619.1StrainInfo: A central database for resolving microbial strain identifiers