Strain identifier
BacDive ID: 161334
Type strain:
Species: Corynebacterium sp.
Strain history: K. Suzuki CNF 094 <-- IAM 12584 <-- NCIB 10087 <-- NCTC 9755 <-- J. H. Humphrey <-- G. F. Newton.
NCBI tax ID(s): 1720 (species)
General
@ref: 67770
BacDive-ID: 161334
keywords: genome sequence, Bacteria, mesophilic
description: Corynebacterium sp. JCM 1326 is a mesophilic bacterium of the family Corynebacteriaceae.
NCBI tax id
- NCBI tax id: 1720
- Matching level: species
strain history
- @ref: 67770
- history: K. Suzuki CNF 094 <-- IAM 12584 <-- NCIB 10087 <-- NCTC 9755 <-- J. H. Humphrey <-- G. F. Newton.
doi: 10.13145/bacdive161334.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Corynebacteriaceae
- genus: Corynebacterium
- species: Corynebacterium sp.
- full scientific name: Corynebacterium Lehmann and Neumann 1896 (Approved Lists 1980)
synonyms
@ref synonym 20215 Caseobacter 20215 Turicella 20215 Bacterionema
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Mycobacteriales
family: Corynebacteriaceae
genus: Corynebacterium
species: Corynebacterium sp.
full scientific name: Corynebacterium sp.
type strain: no
Morphology
cell morphology
@ref | motility | confidence | gram stain |
---|---|---|---|
69480 | no | 95.773 | |
69480 | 100 | positive |
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
spore formation
@ref | spore formation | confidence |
---|---|---|
69480 | no | 99.994 |
69481 | no | 100 |
observation
- @ref: 67770
- observation: quinones: MK-8(H2)
Sequence information
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Corynebacterium striatum strain NCTC9755 | 43770.658 | wgs | patric | 43770 |
66792 | Corynebacterium striatum NCTC 9755 | 2811995199 | draft | img | 43770 |
67770 | Corynebacterium striatum NCTC9755 | GCA_900447625 | contig | ncbi | 43770 |
GC content
- @ref: 67770
- GC-content: 58.7
- method: thermal denaturation, midpoint method (Tm)
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
gram-positive | yes | 93.824 | no |
anaerobic | no | 98.758 | no |
halophile | yes | 77.98 | no |
spore-forming | no | 95.152 | no |
glucose-util | yes | 88.846 | no |
aerobic | no | 67.908 | no |
flagellated | no | 97.792 | no |
thermophile | no | 95.511 | yes |
motile | no | 94.181 | no |
glucose-ferment | yes | 72.188 | no |
External links
@ref: 67770
culture collection no.: JCM 1326, BCRC 13877, IAM 12584, NCDO 1572, NCIMB 10087, NCTC 9755
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes |
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 |