Strain identifier
BacDive ID: 161201
Type strain: 
Species: Nocardia abscessus
Strain history: T. Kudo KNJ59.
NCBI tax ID(s): 120957 (species)
version 9.2 (current version)
General
@ref: 67770
BacDive-ID: 161201
keywords: 16S sequence, Bacteria, mesophilic
description: Nocardia abscessus JCM 12179 is a mesophilic bacterium that was isolated from Soil.
NCBI tax id
- NCBI tax id: 120957
- Matching level: species
strain history
- @ref: 67770
- history: T. Kudo KNJ59.
doi: 10.13145/bacdive161201.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Nocardiaceae
- genus: Nocardia
- species: Nocardia abscessus
- full scientific name: Nocardia abscessus Yassin et al. 2000
@ref: 67770
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Mycobacteriales
family: Nocardiaceae
genus: Nocardia
species: Nocardia abscessus
full scientific name: Nocardia abscessus Yassin et al. 2000
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Soil
- geographic location: Wako City, Saitama Pref.
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_5901.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_243;97_280;98_312;99_5901&stattab=map
- Last taxonomy: Nocardia
- 16S sequence: AB115182
- Sequence Identity:
- Total samples: 14
- soil counts: 9
- plant counts: 5
Sequence information
16S sequences
- @ref: 67770
- description: Nocardia abscessus gene for 16S rRNA, partial sequence, strain:KNJ59
- accession: AB115182
- length: 1441
- database: nuccore
- NCBI tax ID: 120957
External links
@ref: 67770
culture collection no.: JCM 12179, IFM 10308
straininfo link
- @ref: 113272
- straininfo: 111889
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113272 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID111889.1 |