Strain identifier
BacDive ID: 160916
Type strain: 
Species: Bradyrhizobium japonicum
Strain history: K. Minamisawa T7.
NCBI tax ID(s): 375 (species)
version 9 (current version)
General
@ref: 67770
BacDive-ID: 160916
keywords: 16S sequence, Bacteria
description: Bradyrhizobium japonicum JCM 10350 is a bacterium that was isolated from Nodule of Glycine max cultivated in soil collected in Tokachi field at Tokachi Agricultural Station.
NCBI tax id
- NCBI tax id: 375
- Matching level: species
strain history
- @ref: 67770
- history: K. Minamisawa T7.
doi: 10.13145/bacdive160916.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Nitrobacteraceae
- genus: Bradyrhizobium
- species: Bradyrhizobium japonicum
- full scientific name: Bradyrhizobium japonicum (Kirchner 1896) Jordan 1982
synonyms
@ref synonym 20215 Rhizobacterium japonicum 20215 Rhizobium japonicum
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Nitrobacteraceae
genus: Bradyrhizobium
species: Bradyrhizobium japonicum
full scientific name: Bradyrhizobium japonicum (Kirchner 1896) Jordan 1982
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Nodule of Glycine max cultivated in soil collected in Tokachi field at Tokachi Agricultural Station
- host species: Glycine max
- geographic location: Hokkaido
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_445.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_86;96_297;97_329;98_370;99_445&stattab=map
- Last taxonomy: Bradyrhizobium
- 16S sequence: AB231929
- Sequence Identity:
- Total samples: 12887
- soil counts: 5001
- aquatic counts: 2827
- animal counts: 4320
- plant counts: 739
Sequence information
16S sequences
- @ref: 67770
- description: Bradyrhizobium japonicum gene for 16S ribosomal RNA, partial sequence, strain: T7
- accession: AB231929
- length: 1397
- database: nuccore
- NCBI tax ID: 375
External links
@ref: 67770
culture collection no.: JCM 10350
straininfo link
- @ref: 113091
- straininfo: 111467
Reference
| @id | authors | title | doi/url |
|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
| 113091 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID111467.1 |