Strain identifier

BacDive ID: 160880

Type strain: No

Species: Acetobacter xylinum subsp. nonacetoxidans

Strain history: T. Tsuchida BPR2002.

NCBI tax ID(s): 28448 (species)

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General

@ref: 67770

BacDive-ID: 160880

keywords: 16S sequence, Bacteria

description: Acetobacter xylinum subsp. nonacetoxidans JCM 10150 is a bacterium that was isolated from Grapes.

NCBI tax id

  • NCBI tax id: 28448
  • Matching level: species

strain history

  • @ref: 67770
  • history: T. Tsuchida BPR2002.

doi: 10.13145/bacdive160880.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Alphaproteobacteria
  • order: Rhodospirillales
  • family: Acetobacteraceae
  • genus: Acetobacter
  • species: Acetobacter xylinum subsp. nonacetoxidans
  • full scientific name: Acetobacter xylinum subsp. nonacetoxidans Kojima et al. 1998

@ref: 67770

domain: Bacteria

phylum: Proteobacteria

class: Alphaproteobacteria

order: Rhodospirillales

family: Acetobacteraceae

genus: Komagataeibacter

species: Komagataeibacter xylinus

full scientific name: Komagataeibacter xylinus (Brown 1886) Yamada et al. 2013

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 28

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: Q-10

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Grapes
  • country: Japan
  • origin.country: JPN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_79.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_29;96_64;97_67;98_72;99_79&stattab=map
  • Last taxonomy: Komagataeibacter
  • 16S sequence: AB205219
  • Sequence Identity:
  • Total samples: 4067
  • soil counts: 662
  • aquatic counts: 523
  • animal counts: 2327
  • plant counts: 555

Sequence information

16S sequences

  • @ref: 67770
  • description: Gluconacetobacter xylinus gene for 16S rRNA, partial sequence, strain: JCM 10150
  • accession: AB205219
  • length: 1445
  • database: nuccore
  • NCBI tax ID: 28448

GC content

  • @ref: 67770
  • GC-content: 63
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 10150

straininfo link

  • @ref: 113061
  • straininfo: 111404

literature

  • topic: Phylogeny
  • Pubmed-ID: 27393367
  • title: The Characterization of Acetic Acid Bacteria Efficiently Producing Bacterial Cellulose from Sucrose: The Proposal of Acetobacter xylinum subsp. nonacetoxidans subsp. Nov.
  • authors: Kojima Y, Tonouchi N, Tsuchida T, Yoshinaga F, Yamada Y
  • journal: Biosci Biotechnol Biochem
  • DOI: 10.1271/bbb.62.185
  • year: 1998

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
113061Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID111404.1