Strain identifier
BacDive ID: 160872
Type strain:
Species: Leuconostoc gelidum
Strain history: T. Itaya 45.
NCBI tax ID(s): 1244 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 160872
keywords: 16S sequence, Bacteria, mesophilic
description: Leuconostoc gelidum JCM 10097 is a mesophilic bacterium that was isolated from Vacuum-packaged ham stored at the Saitama Chuo Inspection Center.
NCBI tax id
- NCBI tax id: 1244
- Matching level: species
strain history
- @ref: 67770
- history: T. Itaya 45.
doi: 10.13145/bacdive160872.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Leuconostoc
- species: Leuconostoc gelidum
- full scientific name: Leuconostoc gelidum Shaw and Harding 1989
@ref: 67770
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Leuconostocaceae
genus: Leuconostoc
species: Leuconostoc gelidum
full scientific name: Leuconostoc gelidum Shaw and Harding 1989
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 25
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Vacuum-packaged ham stored at the Saitama Chuo Inspection Center
- geographic location: Yono, Saitama Pref.
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_3716.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_22;96_35;97_36;98_457;99_3716&stattab=map
- Last taxonomy: Leuconostoc gelidum
- 16S sequence: LC306837
- Sequence Identity:
- Total samples: 22220
- soil counts: 1578
- aquatic counts: 2226
- animal counts: 17034
- plant counts: 1382
Sequence information
16S sequences
- @ref: 67770
- description: Leuconostoc gelidum gene for 16S ribosomal RNA, partial sequence, strain: JCM 10097
- accession: LC306837
- length: 1486
- database: ena
- NCBI tax ID: 1244
GC content
- @ref: 67770
- GC-content: 38.1
- method: high performance liquid chromatography (HPLC)
External links
@ref: 67770
culture collection no.: JCM 10097
straininfo link
- @ref: 113057
- straininfo: 63055
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |
113057 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID63055.1 |