Strain identifier

BacDive ID: 160872

Type strain: No

Species: Leuconostoc gelidum

Strain history: T. Itaya 45.

NCBI tax ID(s): 1244 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 67770

BacDive-ID: 160872

keywords: 16S sequence, Bacteria, mesophilic

description: Leuconostoc gelidum JCM 10097 is a mesophilic bacterium that was isolated from Vacuum-packaged ham stored at the Saitama Chuo Inspection Center.

NCBI tax id

  • NCBI tax id: 1244
  • Matching level: species

strain history

  • @ref: 67770
  • history: T. Itaya 45.

doi: 10.13145/bacdive160872.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Lactobacillales
  • family: Lactobacillaceae
  • genus: Leuconostoc
  • species: Leuconostoc gelidum
  • full scientific name: Leuconostoc gelidum Shaw and Harding 1989

@ref: 67770

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Lactobacillales

family: Leuconostocaceae

genus: Leuconostoc

species: Leuconostoc gelidum

full scientific name: Leuconostoc gelidum Shaw and Harding 1989

type strain: no

Culture and growth conditions

culture temp

  • @ref: 67770
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Vacuum-packaged ham stored at the Saitama Chuo Inspection Center
  • geographic location: Yono, Saitama Pref.
  • country: Japan
  • origin.country: JPN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_3716.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_22;96_35;97_36;98_457;99_3716&stattab=map
  • Last taxonomy: Leuconostoc gelidum
  • 16S sequence: LC306837
  • Sequence Identity:
  • Total samples: 22220
  • soil counts: 1578
  • aquatic counts: 2226
  • animal counts: 17034
  • plant counts: 1382

Sequence information

16S sequences

  • @ref: 67770
  • description: Leuconostoc gelidum gene for 16S ribosomal RNA, partial sequence, strain: JCM 10097
  • accession: LC306837
  • length: 1486
  • database: ena
  • NCBI tax ID: 1244

GC content

  • @ref: 67770
  • GC-content: 38.1
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 67770

culture collection no.: JCM 10097

straininfo link

  • @ref: 113057
  • straininfo: 63055

Reference

@idauthorstitledoi/url
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
113057Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID63055.1