Strain identifier
BacDive ID: 160858
Type strain:
Species: Variovorax sp.
Strain history: Y. Doi H1 (Ochrobactrum anthropi).
NCBI tax ID(s): 1775536 (species)
version 8.1 (current version)
General
@ref: 67770
BacDive-ID: 160858
keywords: 16S sequence, Bacteria, mesophilic
description: Variovorax sp. JCM 10066 is a mesophilic bacterium that was isolated from Seawater.
NCBI tax id
- NCBI tax id: 1775536
- Matching level: species
strain history
- @ref: 67770
- history: Y. Doi H1 (Ochrobactrum anthropi).
doi: 10.13145/bacdive160858.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Betaproteobacteria
- order: Burkholderiales
- family: Comamonadaceae
- genus: Variovorax
- species: Variovorax sp.
- full scientific name: Variovorax Willems et al. 1991
@ref: 67770
domain: Bacteria
phylum: Proteobacteria
class: Betaproteobacteria
order: Burkholderiales
family: Comamonadaceae
genus: Variovorax
species: Variovorax sp.
full scientific name: Variovorax sp.
type strain: no
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 67770
- sample type: Seawater
- geographic location: Heda, Shizuoka Pref.
- country: Japan
- origin.country: JPN
- continent: Asia
taxonmaps
- @ref: 69479
- File name: preview.99_2305.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1;96_308;97_342;98_387;99_2305&stattab=map
- Last taxonomy: Variovorax
- 16S sequence: LC107429
- Sequence Identity:
- Total samples: 9717
- soil counts: 3106
- aquatic counts: 2157
- animal counts: 2122
- plant counts: 2332
Sequence information
16S sequences
- @ref: 67770
- description: Variovorax sp. JCM 10066 gene for 16S ribosomal RNA, partial sequence
- accession: LC107429
- length: 1457
- database: ena
- NCBI tax ID: 1775536
External links
@ref: 67770
culture collection no.: JCM 10066
Reference
@id | authors | title | doi/url |
---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |