Strain identifier
BacDive ID: 160195
Type strain: 
Species: unclassified bacterium
Strain Designation: NYFB
Strain history: <- S. A. Eichorst, Joint BioEnergy Inst., Emeryville, CA, USA; NYFB <- S. A. Eichorst {2011}
NCBI tax ID(s): 1869227 (species)
General
@ref: 67099
BacDive-ID: 160195
DSM-Number: 25439
keywords: 16S sequence, thermophilic
description: unclassified bacterium NYFB is a thermophilic prokaryote that was isolated from Newby Island compost.
NCBI tax id
- NCBI tax id: 1869227
- Matching level: species
strain history
- @ref: 67099
- history: <- S. A. Eichorst, Joint BioEnergy Inst., Emeryville, CA, USA; NYFB <- S. A. Eichorst {2011}
doi: 10.13145/bacdive160195.20230509.8.1
Name and taxonomic classification
@ref: 67099
phylum: Not assigned to order
class: Not assigned to order
order: Not assigned to order
family: Not assigned to family
genus: unclassified
species: unclassified bacterium
full scientific name: unclassified bacterium
strain designation: NYFB
type strain: no
Culture and growth conditions
culture medium
- @ref: 67099
- name: HALF STRENGTH R2A (DSMZ Medium 1492)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1492
- composition: Name: HALF STRENGTH R2A (DSMZ Medium 1492) Composition: Agar 15.0 g/l Casamino acids 0.25 g/l Na-pyruvate 0.25 g/l Starch 0.25 g/l Glucose 0.25 g/l Proteose peptone 0.25 g/l Yeast extract 0.25 g/l K2HPO4 0.15 g/l MgSO4 x 7 H2O 0.025 g/l Distilled water
culture temp
- @ref: 67099
- growth: positive
- type: growth
- temperature: 60
- range: thermophilic
Isolation, sampling and environmental information
isolation
- @ref: 67099
- sample type: Newby Island compost
- geographic location: Milpitas, CA
- country: USA
- origin.country: USA
- continent: North America
taxonmaps
- @ref: 69479
- File name: preview.99_12301.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_1460;96_6265;97_7523;98_9261;99_12301&stattab=map
- Last taxonomy: Thermoflavifilum
- 16S sequence: JQ033715
- Sequence Identity:
- Total samples: 914
- soil counts: 262
- aquatic counts: 374
- animal counts: 191
- plant counts: 87
Sequence information
16S sequences
- @ref: 67099
- description: Chitinophagaceae bacterium NYFB 16S ribosomal RNA gene, partial sequence
- accession: JQ033715
- length: 1451
- database: ena
- NCBI tax ID: 1123512
External links
@ref: 67099
culture collection no.: DSM 25439
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 67099 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25439) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25439 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |