Strain identifier
BacDive ID: 16019
Type strain: 
Species: Streptomyces manipurensis
Strain history: S.-K. Tang and S. Nimaichand MBRL 201.
NCBI tax ID(s): 1077945 (species)
version 8.1 (current version)
General
@ref: 17534
BacDive-ID: 16019
DSM-Number: 42029
keywords: 16S sequence, Bacteria, mesophilic
description: Streptomyces manipurensis DSM 42029 is a mesophilic bacterium that was isolated from limestone quarry soil.
NCBI tax id
- NCBI tax id: 1077945
- Matching level: species
strain history
| @ref | history |
|---|---|
| 17534 | <- S.-K. Tang, Yunnan Univ., Yunnan Inst. Microbiol. (YIM), Kunming, China; MBRL 201 <- S. Nimaichand |
| 67770 | S.-K. Tang and S. Nimaichand MBRL 201. |
doi: 10.13145/bacdive16019.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces manipurensis
- full scientific name: Streptomyces manipurensis Nimaichand et al. 2021
@ref: 17534
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces manipurensis
full scientific name: Streptomyces manipurensis
type strain: yes
Culture and growth conditions
culture temp
- @ref: 67770
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-9(H6), MK-9(H8)
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 17534 | limestone quarry soil | Manipur | India | IND | Asia |
| 67770 | Soil from a limestone quarry | Hundung, Manipur | India | IND | Asia |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Geologic |
| #Environmental | #Terrestrial | #Soil |
taxonmaps
- @ref: 69479
- File name: preview.99_163.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_144;99_163&stattab=map
- Last taxonomy: Streptomyces
- 16S sequence: JN560156
- Sequence Identity:
- Total samples: 26399
- soil counts: 19336
- aquatic counts: 1680
- animal counts: 1702
- plant counts: 3681
Sequence information
16S sequences
- @ref: 17534
- description: Streptomyces manipurensis strain MBRL 201 16S ribosomal RNA gene, partial sequence
- accession: JN560156
- length: 1523
- database: ena
- NCBI tax ID: 1077945
GC content
| @ref | GC-content | method |
|---|---|---|
| 17534 | 72.9 | |
| 67770 | 72.9 | high performance liquid chromatography (HPLC) |
External links
@ref: 17534
culture collection no.: DSM 42029, JCM 17351, MBRL 201
literature
- topic: Phylogeny
- Pubmed-ID: 22421918
- title: Streptomyces manipurensis sp. nov., a novel actinomycete isolated from a limestone deposit site in Manipur, India.
- authors: Nimaichand S, Zhu WY, Yang LL, Ming H, Nie GX, Tang SK, Ningthoujam DS, Li WJ
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-012-9720-4
- year: 2012
- mesh: Base Composition, *Calcium Carbonate, Carbohydrates/analysis, Cell Wall/chemistry, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Diaminopimelic Acid/analysis, Fatty Acids/analysis, Geologic Sediments/*microbiology, India, Molecular Sequence Data, Phospholipids/analysis, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Streptomyces/*classification/genetics/*isolation & purification, Vitamin K 2/analysis
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 17534 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 42029) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-42029 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |