Strain identifier
BacDive ID: 160122
Type strain: 
Species: Aeoliella mucimassa
Strain Designation: Pan181
Strain history: <- M. Jogler, Leibniz-Institut DSMZ GmbH; Pan181 <- A. Stieler
NCBI tax ID(s): 2527972 (species)
version 8.1 (current version)
General
@ref: 67026
BacDive-ID: 160122
DSM-Number: 29370
keywords: genome sequence, 16S sequence, Bacteria, Gram-negative, other
description: Aeoliella mucimassa Pan181 is a Gram-negative, other bacterium that was isolated from hydrothermal vent.
NCBI tax id
- NCBI tax id: 2527972
- Matching level: species
strain history
- @ref: 67026
- history: <- M. Jogler, Leibniz-Institut DSMZ GmbH; Pan181 <- A. Stieler
doi: 10.13145/bacdive160122.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/planctomycetota
- domain: Bacteria
- phylum: Planctomycetota
- class: Planctomycetia
- order: Pirellulales
- family: Lacipirellulaceae
- genus: Aeoliella
- species: Aeoliella mucimassa
- full scientific name: Aeoliella mucimassa Wiegand et al. 2021
@ref: 67026
domain: Bacteria
phylum: Planctomycetes
class: Planctomycetia
order: Pirellulales
family: Lacipirellulaceae
genus: Aeoliella
species: Aeoliella mucimassa
full scientific name: Aeoliella mucimassa Wiegand et al. 2020
strain designation: Pan181
type strain: yes
Morphology
cell morphology
| @ref | gram stain | cell length | cell width | cell shape | confidence |
|---|---|---|---|---|---|
| 68355 | negative | 1.1-1.7 µm | 0.6-0.8 µm | other | |
| 69480 | negative | 99.999 |
colony morphology
- @ref: 68355
- colony color: white
Culture and growth conditions
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 68355 | positive | growth | 10-39 | |
| 68355 | positive | optimum | 28 | mesophilic |
culture pH
| @ref | ability | type | pH | PH range |
|---|---|---|---|---|
| 68355 | positive | growth | 5.5-9 | alkaliphile |
| 68355 | positive | optimum | 7.5 |
Physiology and metabolism
spore formation
| @ref | spore formation | confidence |
|---|---|---|
| 69480 | no | 99.986 |
| 69481 | no | 100 |
observation
| @ref | observation |
|---|---|
| 68355 | form dense aggregates |
| 68355 | divide by budding |
| 68355 | Cells have crateriform structures and polar ?bres |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent | enrichment culture |
|---|---|---|---|---|---|---|
| 67026 | hydrothermal vent | hydrothermal vent area offshore of Panarea island, Tyrrhenian Sea | Italy | ITA | Europe | |
| 68355 | shallow sea hydrothermal vent system | Panarea Island | Italy | ITA | Europe | M1H NAG ASW medium |
Sequence information
16S sequences
- @ref: 68355
- description: Aeoliella mucimassa strain Pan181 16S ribosomal RNA gene, partial sequence
- accession: MK559982
- length: 1535
- database: ena
- NCBI tax ID: 2527972
Genome sequences
- @ref: 68355
- description: Aeoliella mucimassa Pan181
- accession: GCA_007748035
- assembly level: complete
- database: ncbi
- NCBI tax ID: 2527972
GC content
| @ref | GC-content | method |
|---|---|---|
| 67026 | 58 | sequence analysis |
| 68355 | 58 | genome sequence analysis |
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| spore-forming | no | 100 | no |
| motile | yes | 86.609 | no |
| flagellated | no | 82.247 | no |
| gram-positive | no | 98.522 | yes |
| anaerobic | no | 94.837 | no |
| aerobic | yes | 75.187 | no |
| halophile | no | 77.218 | no |
| spore-forming | no | 88.027 | no |
| glucose-util | yes | 89.045 | no |
| thermophile | no | 95.638 | no |
| glucose-ferment | no | 88.3 | no |
External links
@ref: 67026
culture collection no.: DSM 29370, LMG 31346, CECT 9840, VKM B-3426
straininfo link
- @ref: 112397
- straininfo: 407152
literature
- topic: Phylogeny
- Pubmed-ID: 33151460
- title: Updates to the recently introduced family Lacipirellulaceae in the phylum Planctomycetes: isolation of strains belonging to the novel genera Aeoliella, Botrimarina, Pirellulimonas and Pseudobythopirellula and the novel species Bythopirellula polymerisocia and Posidoniimonas corsicana.
- authors: Wiegand S, Jogler M, Boedeker C, Heuer A, Peeters SH, Kallscheuer N, Jetten MSM, Kaster AK, Rohde M, Jogler C
- journal: Antonie Van Leeuwenhoek
- DOI: 10.1007/s10482-020-01486-3
- year: 2020
- mesh: *Bacteria/genetics, Bacterial Typing Techniques, DNA, Bacterial/genetics, *Fatty Acids, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Transcriptome
Reference
| @id | authors | title | doi/url | catalogue | journal |
|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | ||
| 67026 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-29370 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 29370) | ||
| 68355 | Sandra Wiegand, Mareike Jogler, Christian Boedeker, Anja Heuer, Stijn H. Peeters, Nicolai Kallscheuer, Mike S. M. Jetten, Anne-Kristin Kaster, Manfred Rohde & Christian Jogler | Updates to the recently introduced family Lacipirellulaceae in the phylum Planctomycetes: isolation of strains belonging to the novel genera Aeoliella, Botrimarina, Pirellulimonas and Pseudobythopirellula and the novel species Bythopirellula polymerisocia and Posidoniimonas corsicana | 10.1007/s10482-020-01486-3 | Antonie Van Leeuwenhoek 113: 1979-1997 2020 | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | ||
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | Predictions based on the model GenomeNet Sporulation v. 1 | 10.21203/rs.3.rs-2527258/v1 | ||
| 112397 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID407152.1 |