Strain identifier
BacDive ID: 160019
Type strain: 
Species: Rothia nasisuis
Strain Designation: 1a5R-CH16
Strain history: <- A. Schlattmann, Institute of Medical Microbiology University Hospital Münster; 1a5R-CH16 <-
NCBI tax ID(s): 2109647 (species)
General
@ref: 66923
BacDive-ID: 160019
DSM-Number: 107101
keywords: 16S sequence, Bacteria, mesophilic
description: Rothia nasisuis 1a5R-CH16 is a mesophilic bacterium that was isolated from Porcine nasal swab.
NCBI tax id
- NCBI tax id: 2109647
- Matching level: species
strain history
- @ref: 66923
- history: <- A. Schlattmann, Institute of Medical Microbiology University Hospital Münster; 1a5R-CH16 <-
doi: 10.13145/bacdive160019.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micrococcales
- family: Micrococcaceae
- genus: Rothia
- species: Rothia nasisuis
- full scientific name: Rothia nasisuis Schlattmann et al. 2018
@ref: 66923
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Micrococcales
family: Micrococcaceae
genus: Rothia
species: Rothia nasisuis
full scientific name: Rothia nasisuis Schlattmann et al. 2018
strain designation: 1a5R-CH16
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 66923 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| 66923 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://mediadive.dsmz.de/medium/92 | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
culture temp
- @ref: 66923
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 66923
- sample type: Porcine nasal swab
- geographic location: North Rhine-Westphalia
- country: Germany
- origin.country: DEU
- continent: Europe
taxonmaps
- @ref: 69479
- File name: preview.99_474.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_13;97_347;98_392;99_474&stattab=map
- Last taxonomy: Rothia
- 16S sequence: MH036181
- Sequence Identity:
- Total samples: 3679
- soil counts: 70
- aquatic counts: 562
- animal counts: 3014
- plant counts: 33
Sequence information
16S sequences
- @ref: 66923
- description: Rothia sp. 1a5R-CH16 16S ribosomal RNA gene, partial sequence
- accession: MH036181
- length: 1477
- database: ena
- NCBI tax ID: 2109647
External links
@ref: 66923
culture collection no.: DSM 107101
literature
- topic: Phylogeny
- Pubmed-ID: 30364690
- title: 'Rothia nasisuis' sp. nov., 'Dermabacter porcinasus' sp. nov., 'Propionibacterium westphaliense' sp. nov. and 'Tessaracoccus nasisuum' sp. nov., isolated from porcine nasal swabs in the Munster region, Germany.
- authors: Schlattmann A, von Lutzau K, Kaspar U, Becker K
- journal: New Microbes New Infect
- DOI: 10.1016/j.nmni.2018.09.005
- year: 2018
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66923 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-107101 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 107101) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |