Strain identifier

BacDive ID: 159922

Type strain: No

Species: Arthrobacter sp.

Strain Designation: R5

Strain history: <- S. Yin, Yangzhou Univ., Coll. of Environmental Science and Eng., Jiangsu Prov., China; R5 <- T. Gu

NCBI tax ID(s): 1667 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 66826

BacDive-ID: 159922

DSM-Number: 26978

keywords: 16S sequence, Bacteria, mesophilic

description: Arthrobacter sp. R5 is a mesophilic bacterium that was isolated from citrus soil.

NCBI tax id

  • NCBI tax id: 1667
  • Matching level: species

strain history

  • @ref: 66826
  • history: <- S. Yin, Yangzhou Univ., Coll. of Environmental Science and Eng., Jiangsu Prov., China; R5 <- T. Gu

doi: 10.13145/bacdive159922.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Arthrobacter
  • species: Arthrobacter sp.
  • full scientific name: Arthrobacter Conn and Dimmick 1947 (Approved Lists 1980)

@ref: 66826

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Micrococcales

family: Micrococcaceae

genus: Arthrobacter

species: Arthrobacter sp.

full scientific name: Arthrobacter sp.

strain designation: R5

type strain: no

Culture and growth conditions

culture medium

  • @ref: 66826
  • name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/92
  • composition: Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

culture temp

  • @ref: 66826
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 66826
  • sample type: citrus soil
  • country: China
  • origin.country: CHN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_130.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_9;96_99;97_106;98_115;99_130&stattab=map
  • Last taxonomy: Pseudarthrobacter
  • 16S sequence: KC514135
  • Sequence Identity:
  • Total samples: 1526
  • soil counts: 822
  • aquatic counts: 109
  • animal counts: 156
  • plant counts: 439

Sequence information

16S sequences

  • @ref: 66826
  • description: Arthrobacter sp. R5 16S ribosomal RNA gene, partial sequence
  • accession: KC514135
  • length: 1468
  • database: ena
  • NCBI tax ID: 1300149

GC content

  • @ref: 66826
  • GC-content: 65.9

External links

@ref: 66826

culture collection no.: DSM 26978

straininfo link

  • @ref: 112204
  • straininfo: 400719

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
66826Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-26978Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 26978)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
112204Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID400719.1