Archive BacDiveID:10.13145/bacdive159891.20230509.8.1

Strain identifier

BacDive ID: 159891

Type strain:

Species: Pseudomonas fildesensis

Strain Designation: KG01

Strain history: <- M. Pavlov, Pontificia Univ. Javeriana, Bogotá, Colombia; KG01 <- Instituto Antártico Chileno;

NCBI tax ID(s): 1674920 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 66795

BacDive-ID: 159891

DSM-Number: 102036

keywords: genome sequence, Bacteria, mesophilic

description: Pseudomonas fildesensis KG01 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

NCBI tax id: 1674920
Matching level: species

strain history

@ref: 66795
history: <- M. Pavlov, Pontificia Univ. Javeriana, Bogotá, Colombia; KG01 <- Instituto Antártico Chileno;

doi: 10.13145/bacdive159891.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/pseudomonadota
domain: Bacteria
phylum: Pseudomonadota
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas fildesensis
full scientific name: Pseudomonas fildesensis Pavlov et al. 2020

@ref: 66795

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Pseudomonadaceae

genus: Pseudomonas

species: Pseudomonas fildesensis

full scientific name: Pseudomonas fildesensis Pavlov et al. 2020

strain designation: KG01

type strain: yes

Culture and growth conditions

culture medium

@ref: 66795
name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381)
growth: yes
link: https://mediadive.dsmz.de/medium/381
composition: Name: LB (Luria-Bertani) MEDIUM (DSMZ Medium 381) Composition: Agar 20.0 g/l NaCl 10.0 g/l Tryptone 10.0 g/l Yeast extract 5.0 g/l Distilled water

culture temp

@ref: 66795
growth: positive
type: growth
temperature: 25
range: mesophilic

Isolation, sampling and environmental information

isolation

@ref: 66795
sample type: soil
geographic location: King George Island
country: Antarctica
origin.country: ATA
continent: Australia and Oceania

Sequence information

Genome sequences

@ref	description	accession	assembly level	database	NCBI tax ID
66792	Pseudomonas fildesensis KG01	GCA_001050345	contig	ncbi	1674920
66792	Pseudomonas fildesensis KG01	2654587766	draft	img	1674920

External links

@ref: 66795

culture collection no.: DSM 102036, CECT 9084

straininfo link

@ref: 112174
straininfo: 407478

literature

topic: Phylogeny
Pubmed-ID: 32375985
title: Pseudomonas fildesensis sp. nov., a psychrotolerant bacterium isolated from Antarctic soil of King George Island, South Shetland Islands.
authors: Pavlov MS, Lira F, Martinez JL, Olivares-Pacheco J, Marshall SH
journal: Int J Syst Evol Microbiol
DOI: 10.1099/ijsem.0.004165
year: 2020
mesh: Antarctic Regions, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Genes, Bacterial, Islands, Multilocus Sequence Typing, *Phylogeny, Pseudomonas/*classification/isolation & purification, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology
topic2: Transcriptome

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
66795	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-102036	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102036)
112174	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID407478.1