Strain identifier

BacDive ID: 159778

Type strain: Yes

Species: Streptomyces aqsuensis

NCBI tax ID(s): 2021638 (species)

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General

@ref: 66572

BacDive-ID: 159778

keywords: 16S sequence, Bacteria, aerobe, spore-forming, mesophilic, Gram-positive

description: Streptomyces aqsuensis KCTC 39610 is an aerobe, spore-forming, mesophilic bacterium that was isolated from canal sludge soil collected from Alar.

NCBI tax id

  • NCBI tax id: 2021638
  • Matching level: species

doi: 10.13145/bacdive159778.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces aqsuensis
  • full scientific name: Streptomyces aqsuensis Wang et al. 2018

@ref: 66572

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Streptomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces aqsuensis

type strain: yes

Morphology

cell morphology

  • @ref: 66572
  • gram stain: positive
  • motility: no

colony morphology

  • @ref: 66572
  • colony color: white

pigmentation

  • @ref: 66572
  • production: no

Culture and growth conditions

culture medium

@refnamegrowth
66572Czapek's mediumyes
66572Gause's mediayes
66572ISP 3yes
66572ISP 4yes
66572ISP 6yes
66572Nutrient agar (NA)yes

culture temp

@refgrowthtypetemperaturerange
66572positiveoptimum37mesophilic
66572positivegrowth16-41

culture pH

@refabilitytypepHPH range
66572positivegrowth6-11alkaliphile
66572positivegrowth7-8

Physiology and metabolism

oxygen tolerance

  • @ref: 66572
  • oxygen tolerance: aerobe

spore formation

  • @ref: 66572
  • spore description: At maturity, the aerial mycelia branch abundantly and form spore hyphae. The diameter of spores is about 0.5–1 µm. The hyphae are straight, but sometimes flexuous and branched.
  • spore formation: yes

halophily

@refsaltgrowthtested relationconcentration
66572NaClpositivegrowth0-8 %
66572NaClpositiveoptimum5 %

observation

@refobservation
66572phospholipids are diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylinositol and phosphatidylinositol mannosides
66572predominant menaquinones are MK-9(H6), MK-9(H8) and MK-9(H10)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
665725291gelatin-assimilation
66572milk-assimilation
665726731melezitose-carbon source
6657217151xylitol-carbon source
6657212936D-galactose+carbon source
6657215824D-fructose+carbon source
6657216261chitosan+carbon source
6657216634raffinose+carbon source
6657217057cellobiose+carbon source
6657217234glucose+carbon source
6657217266L-sorbose+carbon source
6657217306maltose+carbon source
6657217716lactose+carbon source
6657217992sucrose+carbon source
6657218287L-fucose+carbon source
6657230849L-arabinose+carbon source
6657233942ribose+carbon source
6657237166xylan+carbon source
6657262345L-rhamnose+carbon source
6657265328L-xylose+carbon source
6657228017starch+hydrolysis
6657217196L-asparagine+nitrogen source
6657218019L-lysine+nitrogen source
6657217632nitrate+reduction

metabolite production

  • @ref: 66572
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: no

enzymes

@refvalueactivityec
66572urease-3.5.1.5
66572catalase+1.11.1.6
66572cytochrome oxidase+1.9.3.1
66572lipase+

Isolation, sampling and environmental information

isolation

  • @ref: 66572
  • sample type: canal sludge soil collected from Alar
  • geographic location: Xinjiang Province
  • country: China
  • origin.country: CHN
  • continent: Asia
  • latitude: 40.3666
  • longitude: 80.5
  • isolation procedure: The sample was isolated on Gause¢s synthetic agar (Gause?s) by using a ten-fold dilution series method, the organism was grown and maintained at 37°C

isolation source categories

Cat1Cat2Cat3
#Engineered#Waste#Sewage sludge
#Engineered#Built environment

Sequence information

16S sequences

  • @ref: 66572
  • description: Streptomyces sp. TRM46399 16S ribosomal RNA gene, partial sequence
  • accession: KY688182
  • length: 1381
  • database: ena
  • NCBI tax ID: 1964550

GC content

  • @ref: 66572
  • GC-content: 68.70
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 66572

culture collection no.: KCTC 39610, CCTCC AA 2015009, TRM 46399

literature

  • topic: Phylogeny
  • Pubmed-ID: 29851373
  • title: Streptomyces aqsuensis sp. nov., isolated from ditch sediment in Xinjiang, China.
  • authors: Wang J, Zhang Q, Wang Y, Qin S, Luo X
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.002804
  • year: 2018
  • mesh: Bacterial Typing Techniques, Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Geologic Sediments/*microbiology, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Streptomyces/*classification/genetics/isolation & purification, Vitamin K 2/analogs & derivatives/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urljournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
66572Jianming Wang, Qiaoyan Zhang, Yang Wang, Song Qin, Xiaoxia LuoStreptomyces aqsuensis sp. nov., isolated from ditch sediment in Xinjiang, China10.1099/ijsem.0.002804IJSEM 68: 2178-2182 201829851373