General

@ref: 66389

BacDive-ID: 159563

DSM-Number: 23854

keywords: 16S sequence, Bacteria, thermophilic

description: Thermovenabulum gondwanense CA9F1 is a thermophilic bacterium that was isolated from water/sediment mixture from a terrestrial hot spring.

NCBI tax id

• NCBI tax id: 520767
• Matching level: species

strain history

• @ref: 66389
• history: <- M. L. Fardeau, Lab. Microbiol. de l'IRD/ESIL, Univ. de Provence et de la Méditerranée, Marseille, France; CA9F1 <- M. L. Fardeau {2006}

doi: 10.13145/bacdive159563.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/bacillota
• domain: Bacteria
• phylum: Bacillota
• class: Clostridia
• order: Thermosediminibacterales
• family: Thermosediminibacteraceae
• genus: Thermovenabulum
• species: Thermovenabulum gondwanense
• full scientific name: Thermovenabulum gondwanense Ogg et al. 2010

@ref: 66389

domain: Bacteria

phylum: Firmicutes

class: Clostridia

order: Thermosediminibacterales

family: Thermosediminibacteraceae

genus: Thermovenabulum

species: Thermovenabulum gondwanense

full scientific name: Thermovenabulum gondwanense Ogg et al. 2010 emend. Pradel et al. 2013

strain designation: CA9F1

type strain: no

Culture and growth conditions

culture medium

• @ref: 66389
• name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)
• growth: yes
• link: https://mediadive.dsmz.de/medium/104c
• composition: Name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water

culture temp

• @ref: 66389
• growth: positive
• type: growth
• temperature: 65
• range: thermophilic

Isolation, sampling and environmental information

isolation

• @ref: 66389
• sample type: water/sediment mixture from a terrestrial hot spring
• geographic location: Chaudes Aigues, Source du Moulin du Ban
• country: France
• origin.country: FRA
• continent: Europe
• latitude: 45.42
• longitude: 3.0078

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_5418.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_499;96_2628;97_3218;98_4042;99_5418&stattab=map
• Last taxonomy: Thermovenabulum gondwanense subclade
• 16S sequence: JX402413
• Sequence Identity:
• Total samples: 31
• soil counts: 1
• aquatic counts: 28
• animal counts: 2

Safety information

risk assessment

• @ref: 66389
• biosafety level: 1
• biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

• @ref: 66389
• description: Thermovenabulum sp. CA9F1 16S ribosomal RNA gene, partial sequence
• accession: JX402413
• length: 1143
• database: ena
• NCBI tax ID: 1229161

External links

@ref: 66389

culture collection no.: DSM 23854

straininfo link

• @ref: 112042
• straininfo: 397941

literature

• topic: Phylogeny
• Pubmed-ID: 23743634
• title: Isolation of Thermovenabulum gondwanense from a French hot spring and emended description of the species.
• authors: Pradel N, Bartoli M, Bernadac A, Gimenez G, Ollivier B, Fardeau ML
• journal: Antonie Van Leeuwenhoek
• DOI: 10.1007/s10482-013-9947-8
• year: 2013
• mesh: Bacterial Typing Techniques, Base Composition, Base Sequence, Cell Wall/chemistry, DNA, Bacterial/genetics, Fatty Acids/analysis, France, Gram-Positive Bacteria/*classification/genetics/*isolation & purification, Hot Springs/*microbiology, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Alignment, Sequence Analysis, DNA
• topic2: Genetics

Reference