Strain identifier
BacDive ID: 159407
Type strain: 
Species: Geodermatophilus sp.
Strain history: <- M. Gtari, Tunisia; BMG 8131 <- K. Hezbri, Tunisia
NCBI tax ID(s): 52020 (species)
version 8.1 (current version)
General
@ref: 66230
BacDive-ID: 159407
DSM-Number: 46843
keywords: 16S sequence, Bacteria, mesophilic
description: Geodermatophilus sp. DSM 46843 is a mesophilic bacterium that was isolated from sandstone Bulla Regia monument.
NCBI tax id
- NCBI tax id: 52020
- Matching level: species
strain history
- @ref: 66230
- history: <- M. Gtari, Tunisia; BMG 8131 <- K. Hezbri, Tunisia
doi: 10.13145/bacdive159407.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Geodermatophilales
- family: Geodermatophilaceae
- genus: Geodermatophilus
- species: Geodermatophilus sp.
- full scientific name: Geodermatophilus Luedemann 1968 (Approved Lists 1980)
synonyms
@ref synonym 20215 Pleomorpha 20215 Petropleomorpha
@ref: 66230
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Geodermatophilales
family: Geodermatophilaceae
genus: Geodermatophilus
species: Geodermatophilus sp.
full scientific name: Geodermatophilus sp.
type strain: no
Morphology
multimedia
| @ref | multimedia content | caption | intellectual property rights |
|---|---|---|---|
| 66793 | EM_DSM_46843_1.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_46843_2.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_46843_3.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_46843_4.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_46843_5.jpg | electron microscopic image | © HZI/Manfred Rohde |
Culture and growth conditions
culture medium
- @ref: 66230
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://mediadive.dsmz.de/medium/65
- composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
culture temp
- @ref: 66230
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 66230
- sample type: sandstone Bulla Regia monument
- country: Tunisia
- origin.country: TUN
- continent: Africa
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Sandy
taxonmaps
- @ref: 69479
- File name: preview.99_5352.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_94;96_2039;97_3177;98_3990;99_5352&stattab=map
- Last taxonomy: Geodermatophilus
- 16S sequence: LN626268
- Sequence Identity:
- Total samples: 1553
- soil counts: 1025
- aquatic counts: 218
- animal counts: 141
- plant counts: 169
Sequence information
16S sequences
- @ref: 66230
- description: Geodermatophilus sp. BMG 8131 partial 16S rRNA gene, strain BMG 8131
- accession: LN626268
- length: 1372
- database: ena
- NCBI tax ID: 1564157
External links
@ref: 66230
culture collection no.: DSM 46843, BMG 8131
straininfo link
- @ref: 111902
- straininfo: 397060
Reference
| @id | authors | title | doi/url | catalogue | journal | pubmed |
|---|---|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |||
| 66230 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-46843 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 46843) | |||
| 66793 | Mukherjee et al. | GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life | 10.1038/nbt.3886 | 35: 676-683 2017 | 28604660 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |||
| 111902 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID397060.1 |