Strain identifier
BacDive ID: 159211
Type strain: 
Species: Subdoligranulum sp.
Strain Designation: ic1395
Strain history: <- R. Engberg, Aarhus University, Dept. of Animal Health and Bioscience; ic1395 <- R. Engberg {2005}
NCBI tax ID(s): 2053618 (species)
General
@ref: 66034
BacDive-ID: 159211
DSM-Number: 23681
keywords: 16S sequence, Bacteria, mesophilic
description: Subdoligranulum sp. ic1395 is a mesophilic bacterium that was isolated from gastrointestinal tract of broiler chicken Gallus gallus domesticus.
NCBI tax id
- NCBI tax id: 2053618
- Matching level: species
strain history
- @ref: 66034
- history: <- R. Engberg, Aarhus University, Dept. of Animal Health and Bioscience; ic1395 <- R. Engberg {2005}
doi: 10.13145/bacdive159211.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Oscillospiraceae
- genus: Subdoligranulum
- species: Subdoligranulum sp.
- full scientific name: Subdoligranulum Holmstrøm et al. 2004
@ref: 66034
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Oscillospiraceae
genus: Subdoligranulum
species: Subdoligranulum sp.
full scientific name: Subdoligranulum sp.
strain designation: ic1395
type strain: no
Culture and growth conditions
culture medium
- @ref: 66034
- name: BUTYRIVIBRIO SP. MEDIUM (DSMZ Medium 704)
- growth: yes
- link: https://mediadive.dsmz.de/medium/704
- composition: Name: BUTYRIVIBRIO SP. MEDIUM (DSMZ Medium 704) Composition: Na2CO3 3.996 g/l Yeast extract 1.998 g/l Trypticase peptone 1.998 g/l Cellobiose 0.999001 g/l Starch 0.999001 g/l D-Glucose 0.999001 g/l Maltose 0.999001 g/l NaCl 0.899101 g/l Glycerol 0.499501 g/l KH2PO4 0.44955 g/l (NH4)2SO4 0.44955 g/l K2HPO4 0.2997 g/l L-Cysteine HCl x H2O 0.24975 g/l Na2S x 9 H2O 0.24975 g/l MgSO4 x 7 H2O 0.187313 g/l CaCl2 x 2 H2O 0.11988 g/l Haemin 0.000999001 g/l Sodium resazurin 0.0004995 g/l Propionic acid NaOH iso-Valeric acid DL-2-Methylbutyric acid iso-Butyric acid n-Valeric acid Butyric acid Acetic acid Distilled water
culture temp
- @ref: 66034
- growth: positive
- type: growth
- temperature: 37
Isolation, sampling and environmental information
isolation
- @ref: 66034
- sample type: gastrointestinal tract (caecum) of broiler chicken Gallus gallus domesticus
- country: Denmark
- origin.country: DNK
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host Body Product | #Gastrointestinal tract | #Caecal content |
| #Host | #Birds | #Chicken |
| #Host Body-Site | #Gastrointestinal tract | #Rectum |
Sequence information
16S sequences
- @ref: 66034
- description: Bacterium ic1395 16S ribosomal RNA gene, partial sequence
- accession: DQ057482
- length: 1450
- database: nuccore
- NCBI tax ID: 330061
External links
@ref: 66034
culture collection no.: DSM 23681
straininfo link
- @ref: 111710
- straininfo: 402882
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66034 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23681 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23681) | |
| 111710 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID402882.1 |