Strain identifier
BacDive ID: 159209
Type strain: 
Species: Nocardioides sp.
Strain Designation: FMN08
Strain history: <- F. Ozdemir Kocak, Bilecik Seyh Edebali Univ., Turkey; FMN08 <- F. O. Kocak, Ondokuz Mayis Univ., Turkey
NCBI tax ID(s): 35761 (species)
General
@ref: 66032
BacDive-ID: 159209
DSM-Number: 27875
keywords: 16S sequence, Bacteria, mesophilic
description: Nocardioides sp. FMN08 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 35761
- Matching level: species
strain history
- @ref: 66032
- history: <- F. Ozdemir Kocak, Bilecik Seyh Edebali Univ., Turkey; FMN08 <- F. O. Kocak, Ondokuz Mayis Univ., Turkey
doi: 10.13145/bacdive159209.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Propionibacteriales
- family: Nocardioidaceae
- genus: Nocardioides
- species: Nocardioides sp.
- full scientific name: Nocardioides Prauser 1976 (Approved Lists 1980)
synonyms
@ref synonym 20215 Marmoricola 20215 Pimelobacter
@ref: 66032
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Propionibacteriales
family: Nocardioidaceae
genus: Nocardioides
species: Nocardioides sp.
full scientific name: Nocardioides sp.
strain designation: FMN08
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 66032 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf | |
| 66032 | R2A MEDIUM (DSMZ Medium 830) | yes | https://mediadive.dsmz.de/medium/830 | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
culture temp
- @ref: 66032
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 66032
- sample type: soil
- geographic location: Moscow, Yugo Zapadnaya
- country: Russia
- origin.country: RUS
- continent: Europe
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
taxonmaps
- @ref: 69479
- File name: preview.99_7662.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_142;96_3563;97_4377;98_5605;99_7662&stattab=map
- Last taxonomy: Nocardioides
- 16S sequence: JN896615
- Sequence Identity:
- Total samples: 15718
- soil counts: 9755
- aquatic counts: 920
- animal counts: 2174
- plant counts: 2869
Sequence information
16S sequences
- @ref: 66032
- description: Nocardioides sp. FMN08 16S ribosomal RNA gene, partial sequence
- accession: JN896615
- length: 1507
- database: nuccore
- NCBI tax ID: 1124756
External links
@ref: 66032
culture collection no.: DSM 27875
straininfo link
- @ref: 111708
- straininfo: 401421
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66032 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-27875 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 27875) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 111708 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID401421.1 |