Strain identifier
BacDive ID: 159191
Type strain: 
Species: Ancylobacter plantiphilus
Strain Designation: 1TC
Strain history: <- N. V. Doronina, Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Science, Pushchino, Russia; 1TC
NCBI tax ID(s): 2579975 (species)
General
@ref: 66014
BacDive-ID: 159191
DSM-Number: 106438
keywords: 16S sequence, Bacteria, mesophilic
description: Ancylobacter plantiphilus 1TC is a mesophilic bacterium that was isolated from soil sample of rhizosphere of white clover .
NCBI tax id
- NCBI tax id: 2579975
- Matching level: species
strain history
- @ref: 66014
- history: <- N. V. Doronina, Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Science, Pushchino, Russia; 1TC
doi: 10.13145/bacdive159191.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Xanthobacteraceae
- genus: Ancylobacter
- species: Ancylobacter plantiphilus
- full scientific name: Ancylobacter plantiphilus Chemodurova et al. 2020
@ref: 66014
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Hyphomicrobiales
family: Xanthobacteraceae
genus: Ancylobacter
species: Ancylobacter plantiphilus
full scientific name: Ancylobacter plantiphilus
strain designation: 1TC
type strain: yes
Culture and growth conditions
culture medium
- @ref: 66014
- name: R2A MEDIUM (DSMZ Medium 830)
- growth: yes
- link: https://mediadive.dsmz.de/medium/830
- composition: Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
culture temp
- @ref: 66014
- growth: positive
- type: growth
- temperature: 28
Isolation, sampling and environmental information
isolation
- @ref: 66014
- sample type: soil sample of rhizosphere of white clover (Trifolium repens L.)
- host species: Trifolium repens L.
- geographic location: Pushchino, Moscow oblast
- country: Russia
- origin.country: RUS
- continent: Europe
- latitude: 54.83
- longitude: 37.61
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Plant | #Rhizosphere |
| #Environmental | #Terrestrial | #Soil |
Sequence information
16S sequences
- @ref: 66014
- description: Ancylobacter plantiphilus strain 1TC 16S ribosomal RNA gene, partial sequence
- accession: MK931437
- length: 1378
- database: nuccore
- NCBI tax ID: 2579975
External links
@ref: 66014
culture collection no.: DSM 106438, VKM B-3219
straininfo link
- @ref: 111693
- straininfo: 406213
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 66014 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-106438 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 106438) | |
| 111693 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID406213.1 |