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Strain identifier

BacDive ID: 159087

Type strain: Yes

Species: Laedolimicola ammoniilytica

Strain Designation: Sanger_04

Strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; Sanger_04 <- H. Browne {2014}

NCBI tax ID(s): 1869227 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 65910

BacDive-ID: 159087

DSM-Number: 102317

keywords: Bacteria, mesophilic

description: Laedolimicola ammoniilytica Sanger_04 is a mesophilic bacterium that was isolated from faeces from healthy human.

NCBI tax id

  • NCBI tax id: 1869227
  • Matching level: species

strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; Sanger_04 <- H. Browne {2014}

doi: 10.13145/bacdive159087.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Clostridia
  • order: Eubacteriales
  • family: Lachnospiraceae
  • genus: Laedolimicola
  • species: Laedolimicola ammoniilytica
  • full scientific name: Laedolimicola ammoniilytica Hitch et al. 2022

@ref: 65910

genus: Laedolimicola

species: Laedolimicola ammoniilytica

full scientific name: Laedolimicola ammoniilytica

strain designation: Sanger_04

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
65910PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c)yeshttps://mediadive.dsmz.de/medium/104cName: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water
65910CMC MEDIUM (N2/CO2) (DSMZ Medium 110a)yeshttps://mediadive.dsmz.de/medium/110aName: CMC MEDIUM (N2/CO2) (DSMZ Medium 110a) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Yeast extract 5.0 g/l K2HPO4 5.0 g/l D-Glucose 4.0 g/l Na2CO3 1.5 g/l Cellobiose 1.0 g/l Maltose 1.0 g/l Starch 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l Sodium resazurin 0.0005 g/l NaOH Distilled water

culture temp

  • @ref: 65910
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 65910
  • sample type: faeces from healthy human
  • geographic location: Cambridgeshire, Hinxton
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Gastrointestinal tract#Feces (Stool)

Sequence information

Genome sequences

  • @ref: 66792
  • description: Laedolimicola ammoniilytica Sanger_04
  • accession: GCA_025567165
  • assembly level: scaffold
  • database: ncbi
  • NCBI tax ID: 2981771

GC content

  • @ref: 65910
  • GC-content: 49.8
  • method: sequence analysis

External links

@ref: 65910

culture collection no.: DSM 102317, JCM 34983

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
65910Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-102317Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102317)
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg OvermannAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)https://diaspora-project.de/progress.html#genomes