Strain identifier
BacDive ID: 159078
Type strain: 
Species: unclassified bacterium
Strain history: <- R. Tanner, Dept. Botany and Microbiol., Univ. Oklahoma, USA; CAT 12a <- R. Tanner {2008}
NCBI tax ID(s): 1869227 (species)
version 8.1 (current version)
General
@ref: 65901
BacDive-ID: 159078
DSM-Number: 23666
keywords: 16S sequence, mesophilic
description: unclassified bacterium DSM 23666 is a mesophilic prokaryote that was isolated from cattle manure.
NCBI tax id
- NCBI tax id: 1869227
- Matching level: species
strain history
- @ref: 65901
- history: <- R. Tanner, Dept. Botany and Microbiol., Univ. Oklahoma, USA; CAT 12a <- R. Tanner {2008}
doi: 10.13145/bacdive159078.20230509.8.1
Name and taxonomic classification
@ref: 65901
phylum: Not assigned to order
class: Not assigned to order
order: Not assigned to order
family: Not assigned to family
genus: unclassified
species: unclassified bacterium
full scientific name: unclassified bacterium
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 65901 | PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) | yes | https://mediadive.dsmz.de/medium/104c | Name: PY + X MEDIUM (N2/CO2) (DSMZ Medium 104c) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l Na2CO3 1.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water |
| 65901 | WILKINS-CHALGREN ANAEROBE BROTH (N2/CO2) (DSMZ Medium 339a) | yes | https://mediadive.dsmz.de/medium/339a | Name: WILKINS-CHALGREN ANAEROBE BROTH (N2/CO2) (DSMZ Medium 339a) Composition: dehydrated Wilkins-Chalgren medium 33.0 g/l D-Glucose 5.0 g/l L-Cysteine HCl 0.3 g/l Sodium resazurin 0.0005 g/l Distilled water |
culture temp
- @ref: 65901
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 65901
- sample type: cattle manure
- geographic location: Oklahoma, Stillwater
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Bovinae (Cow, Cattle) |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
taxonmaps
- @ref: 69479
- File name: preview.99_92998.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_2616;96_38313;97_48752;98_63996;99_92998&stattab=map
- Last taxonomy: Oscillospiraceae
- 16S sequence: HQ283402
- Sequence Identity:
- Total samples: 3653
- soil counts: 568
- aquatic counts: 894
- animal counts: 2007
- plant counts: 184
Sequence information
16S sequences
- @ref: 65901
- description: Clostridiales bacterium CAT 12a 16S ribosomal RNA gene, partial sequence
- accession: HQ283402
- length: 1494
- database: ena
- NCBI tax ID: 998444
External links
@ref: 65901
culture collection no.: DSM 23666, CAT 12a
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 65901 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 23666) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-23666 | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta |