Strain identifier
BacDive ID: 159016
Type strain: 
Species: Pseudomonas aeruginosa
Strain Designation: OK1
Strain history: <- O. Kaup; OK1
NCBI tax ID(s): 287 (species)
version 8.1 (current version)
General
@ref: 65839
BacDive-ID: 159016
DSM-Number: 110864
keywords: Bacteria, mesophilic, antibiotic resistance, human pathogen
description: Pseudomonas aeruginosa OK1 is a mesophilic human pathogen that has multiple antibiotic resistances and was isolated from Human invasive ear infection.
NCBI tax id
- NCBI tax id: 287
- Matching level: species
strain history
- @ref: 65839
- history: <- O. Kaup; OK1
doi: 10.13145/bacdive159016.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas aeruginosa
- full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bacterium aeruginosum
@ref: 65839
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas aeruginosa
full scientific name: Pseudomonas aeruginosa (Schroeter 1872) Migula 1900
strain designation: OK1
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 65839 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
| 65839 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://mediadive.dsmz.de/medium/92 | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
culture temp
- @ref: 65839
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
antibiogram
- @ref: 65839
- medium: Mueller Hinton
- incubation temperature: 37
- oxygen condition: aerob
- Penicillin G: 0
- oxacillin: 0
- ampicillin: 0
- ticarcillin: 16-18
- mezlocillin: 8
- cefalotin: 0
- cefazolin: 0
- cefotaxime: 0
- aztreonam: 18-20
- imipenem: 12
- tetracycline: 12-14
- chloramphenicol: 0
- gentamycin: 0
- amikacin: 20
- vancomycin: 0
- erythromycin: 0
- lincomycin: 0
- ofloxacin: 0
- norfloxacin: 0
- colistin: 14
- pipemidic acid: 0
- nitrofurantoin: 0
- bacitracin: 0
- polymyxin b: 14-16
- kanamycin: 6
- neomycin: 16-18
- doxycycline: 10
- ceftriaxone: 0
- clindamycin: 0
- fosfomycin: 24
- moxifloxacin: 0
- linezolid: 0
- nystatin: 0
- quinupristin/dalfopristin: 0
- teicoplanin: 0
- piperacillin/tazobactam: 14
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | + | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | + | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | + | assimilation |
| 68369 | 16899 | D-mannitol | + | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | - | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | + | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | + | hydrolysis |
| 68369 | 17634 | D-glucose | - | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | + | 1.9.3.1 |
| 68369 | gelatinase | + | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | + | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65839 | - | - | - | + | - | - | + | - | + | - | - | + | + | - | + | + | + | + | + | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 65839
- sample type: Human invasive ear infection
- geographic location: NRW, Ostwestfalen-Lippe
- country: Germany
- origin.country: DEU
- continent: Europe
- latitude: 52.0333
- longitude: 8.5333
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host Body-Site | #Organ | #Ear |
| #Host | #Human | |
| #Infection | #Inflammation |
Safety information
risk assessment
- @ref: 65839
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 65839
culture collection no.: DSM 110864
straininfo link
- @ref: 111530
- straininfo: 399911
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 65839 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-110864 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 110864) | |
| 68369 | Automatically annotated from API 20NE | |||
| 111530 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID399911.1 |