Strain identifier

BacDive ID: 158798

Type strain: Yes

Species: Aurantisolimonas haloimpatiens

Strain Designation: BN130233

Strain history: <- Chang-Jin Kim, KRIBB

NCBI tax ID(s): 1638097 (species)

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General

@ref: 65078

BacDive-ID: 158798

DSM-Number: 103550

keywords: 16S sequence, Bacteria, obligate aerobe, mesophilic, Gram-negative, rod-shaped

description: Aurantisolimonas haloimpatiens BN130233 is an obligate aerobe, mesophilic, Gram-negative bacterium that was isolated from Soil.

NCBI tax id

  • NCBI tax id: 1638097
  • Matching level: species

strain history

@refhistory
65078<- C. JIN, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea; BN130233
67771<- Chang-Jin Kim, KRIBB

doi: 10.13145/bacdive158798.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Chitinophagia
  • order: Chitinophagales
  • family: Chitinophagaceae
  • genus: Aurantisolimonas
  • species: Aurantisolimonas haloimpatiens
  • full scientific name: Aurantisolimonas haloimpatiens Liu et al. 2018

@ref: 65078

domain: Bacteria

phylum: Bacteroidetes

class: Chitinophagia

order: Chitinophagales

family: Chitinophagaceae

genus: Aurantisolimonas

species: Aurantisolimonas haloimpatiens

full scientific name: Aurantisolimonas haloimpatiens Liu et al. 2018

strain designation: BN130233

type strain: yes

Morphology

cell morphology

  • @ref: 65558
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 65558
  • colony color: orange
  • incubation period: 5 days
  • medium used: R2A

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
65078R2A MEDIUM (DSMZ Medium 830)yeshttps://mediadive.dsmz.de/medium/830Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
65558Nutrient agar (NA)yes
655580.1x TSAyes
65558Marine agar (MA)no
65558PDAno
65558LB (Luria-Bertani) MEDIUMno
65558Trypticase Soy Agar (TSA)no
65558Reasoner's 2A agar (R2A)yes
65558McConkey agarno

culture temp

@refgrowthtypetemperaturerange
65078positivegrowth28mesophilic
65558positivegrowth4-32
65558positiveoptimum20-28
67771positivegrowth28mesophilic

culture pH

@refabilitytypepH
65558positivegrowth6.0-8.0
65558positiveoptimum7.0

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
65558obligate aerobe
67771aerobe

halophily

  • @ref: 65558
  • salt: NaCl
  • growth: positive
  • tested relation: growth
  • concentration: 0 %(w/v)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6555822599arabinose-carbon source
6555818305arbutin+builds acid from
6555817057cellobiose+builds acid from
6555862968cellulose-hydrolysis
6555832528turanose+builds acid from
655584853esculin+builds acid from
655584853esculin+hydrolysis
6555828757fructose-carbon source
6555828260galactose-carbon source
655585291gelatin+hydrolysis
6555828066gentiobiose+builds acid from
6555817234glucose-carbon source
6555817234glucose-fermentation
6555817268myo-inositol-carbon source
6555817716lactose+builds acid from
6555817716lactose+carbon source
6555817306maltose+builds acid from
6555829864mannitol+carbon source
6555837684mannose-carbon source
655586731melezitose+builds acid from
6555828053melibiose+builds acid from
65558milk-hydrolysis
6555817632nitrate+reduction
6555816634raffinose+builds acid from
6555826546rhamnose-carbon source
6555817814salicin+builds acid from
6555828017starch-hydrolysis
6555828017starch+carbon source
6555817992sucrose-carbon source
6555817992sucrose+builds acid from
6555827082trehalose+builds acid from
6555853424tween 20-hydrolysis
6555853423tween 40-hydrolysis
6555853425tween 60-hydrolysis
6555853426tween 80-hydrolysis
6555818222xylose-carbon source

antibiotic resistance

@refChEBImetaboliteis antibioticis sensitivesensitivity conc.is resistantresistance conc.
655586472lincomycinyesyes15 µg (disc)
6555828971ampicillinyesyes20 µg (disc)
6555817076streptomycinyesyes25 µg (disc)
655582637amikacinyesyes30 µg (disc)
6555817698chloramphenicolyesyes30 µg (disc)
6555848923erythromycinyesyes30 µg (disc)
6555817833gentamicinyesyes30 µg (disc)
6555828077rifampicinyesyes30 µg (disc)
6555829687teicoplaninyesyes30 µg (disc)
6555827902tetracyclineyesyes30 µg (disc)
6555828001vancomycinyesyes30 µg (disc)
655589215spectinomycinyesyes25 µg (disc)
655586104kanamycinyesyes30 µg (disc)
65558100147nalidixic acidyesyes30 µg (disc)

metabolite production

  • @ref: 65558
  • Chebi-ID: 16136
  • metabolite: hydrogen sulfide
  • production: no

enzymes

@refvalueactivityec
65558cytochrome oxidase-1.9.3.1
65558catalase-1.11.1.6
65558urease-3.5.1.5
65558esterase (C 4)+
65558alpha-fucosidase+3.2.1.51
65558alpha-galactosidase+3.2.1.22
65558beta-galactosidase+3.2.1.23
65558beta-glucuronidase+3.2.1.31
65558N-acetyl-beta-glucosaminidase+3.2.1.52
65558beta-glucosidase+3.2.1.21
65558naphthol-AS-BI-phosphohydrolase+
65558acid phosphatase-3.1.3.2
65558alkaline phosphatase-3.1.3.1
65558alpha-chymotrypsin-3.4.21.1
65558cystine arylamidase-3.4.11.3
65558esterase Lipase (C 8)-
65558alpha-glucosidase-3.2.1.20
65558leucine arylamidase-3.4.11.1
65558lipase (C 14)-
65558alpha-mannosidase-3.2.1.24
65558trypsin-3.4.21.4
65558valine arylamidase-
65558arginine dihydrolase-3.5.3.6

fatty acid profile

  • fatty acids

    @reffatty acidpercentage
    65558C15:0 iso18.21
    65558C15:0 anteiso3.99
    65558C15:1 iso G23.42
    65558C16:03.79
    65558C16:1ω5c3.69
    65558C17:0 iso 3OH12.92
    65558C15:0 iso 2OH / C16:1ω7c25.27
  • type of FA analysis: whole cell analysis
  • incubation medium: R2A
  • incubation temperature: 28
  • incubation time: 3
  • library/peak naming table: TSBA6
  • system: MIS MIDI
  • method/protocol: Sasser, 1990
  • cutoff value:

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentsampling dategeographic locationlatitudelongitudeenrichment cultureenrichment culture durationenrichment culture temperature
65078SoilRepublic of KoreaKORAsia
65558soil sampleRepublic of KoreaKORAsia2016-07Gyeongsangbuk-do35.7731129.354R2A14 days28
67771From a soil sample collected from Gyeongsangbuk-doRepublic of KoreaKORAsia

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Sequence information

16S sequences

  • @ref: 65078
  • description: Chitinophaga sp. BN130233 16S ribosomal RNA gene, partial sequence
  • accession: KP419742.1
  • length: 1428
  • database: ena
  • NCBI tax ID: 1638097

GC content

  • @ref: 65558
  • GC-content: 40.6
  • method: high performance liquid chromatography (HPLC)

External links

@ref: 65078

culture collection no.: CCTCC AB 2017051, KCTC 42642, DSM 103550

straininfo link

  • @ref: 111343
  • straininfo: 399930

literature

  • topic: Phylogeny
  • Pubmed-ID: 29537366
  • title: Aurantisolimonas haloimpatiens gen. nov., sp. nov., a bacterium isolated from soil.
  • authors: Liu MJ, Jin CZ, Asem MD, Ju YJ, Park DJ, Salam N, Xiao M, Li WJ, Kim CJ
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijsem.0.002709
  • year: 2018
  • mesh: Bacterial Typing Techniques, Bacteroidetes/*classification/genetics/isolation & purification, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Republic of Korea, Sequence Analysis, DNA, *Soil Microbiology, Vitamin K 2/analogs & derivatives/chemistry
  • topic2: Transcriptome

Reference

@idauthorstitledoi/urlcataloguejournalpubmed
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
65078Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-103550Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 103550)
65558Min-Jiao Liu, Chun-Zhi Jin, Mipeshwaree Devi Asem, Yoon-Jung Ju, Dong-Jin Park, Nimaichand Salam, Min Xiao, Wen-Jun Li and Chang-Jin KimAurantisolimonas haloimpatiens gen. nov., sp. nov., a bacterium isolated from soil10.1099/ijsem.0.002709IJSEM 68: 1552-1559 201829537366
67771Curators of the KCTChttps://kctc.kribb.re.kr/En/Kctc
111343Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399930.1