Archive BacDiveID:10.13145/bacdive158165.20230509.8.1

Strain identifier

BacDive ID: 158165

Type strain:

Species: Aedoeadaptatus acetigenes

Strain Designation: E51

Strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; E51

NCBI tax ID(s): 1971214 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.

General

@ref: 64758

BacDive-ID: 158165

DSM-Number: 107480

keywords: genome sequence, Bacteria, mesophilic

description: Aedoeadaptatus acetigenes E51 is a mesophilic bacterium that was isolated from human faeces.

NCBI tax id

NCBI tax id: 1971214
Matching level: species

strain history

@ref: 64758
history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; E51

doi: 10.13145/bacdive158165.20230509.8.1

Name and taxonomic classification

LPSN

@ref: 20215
description: domain/bacteria
keyword: phylum/bacillota
domain: Bacteria
phylum: Bacillota
class: Clostridia
order: Eubacteriales
family: Peptoniphilaceae
genus: Aedoeadaptatus
species: Aedoeadaptatus acetigenes
full scientific name: Aedoeadaptatus acetigenes Hitch et al. 2022

@ref: 64758

domain: Bacteria

phylum: Bacillota

class: Clostridia

order: Eubacteriales

family: Peptoniphilaceae

genus: Aedoeadaptatus

species: Aedoeadaptatus acetigenes

full scientific name: Aedoeadaptatus acetigenes Hitch et al. 2022

strain designation: E51

type strain: yes

Culture and growth conditions

culture medium

@ref: 64758
name: PYG MEDIUM (MODIFIED) (DSMZ Medium 104)
growth: yes
link: https://mediadive.dsmz.de/medium/104
composition: Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water

culture temp

@ref: 64758
growth: positive
type: growth
temperature: 37
range: mesophilic

Isolation, sampling and environmental information

isolation

@ref: 64758
sample type: human faeces
geographic location: Calgary
country: Canada
origin.country: CAN
continent: North America

isolation source categories

Cat1	Cat2	Cat3
#Host	#Human
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Sequence information

Genome sequences

@ref: 66792
description: Aedoeadaptatus acetigenes E51
accession: GCA_025566985
assembly level: scaffold
database: ncbi
NCBI tax ID: 2981723

Genome-based predictions

predictions

trait	prediction	confidence	training_data
motile	no	92.631	no
flagellated	no	96.574	no
gram-positive	yes	87.769	no
anaerobic	yes	99.721	no
aerobic	no	98.817	no
halophile	no	79.669	no
spore-forming	no	72.532	no
glucose-ferment	yes	59.599	no
thermophile	no	95.17	no
glucose-util	yes	75.214	no

External links

@ref: 64758

culture collection no.: DSM 107480, JCM 34812

straininfo link

@ref: 110996
straininfo: 400818

Reference

@id	authors	title	doi/url	catalogue
20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.	List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ	10.1099/ijsem.0.004332
64758	Curators of the DSMZ		https://www.dsmz.de/collection/catalogue/details/culture/DSM-107480	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 107480)
66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann	Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)	https://diaspora-project.de/progress.html#genomes
110996	Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.	StrainInfo: A central database for resolving microbial strain identifiers	10.60712/SI-ID400818.1