Strain identifier

BacDive ID: 158110

Type strain: No

Species: Alistipes onderdonkii subsp. onderdonkii

Strain Designation: H3_19

Strain history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; H3_19

NCBI tax ID(s): 2706586 (subspecies)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 64689

BacDive-ID: 158110

DSM-Number: 108231

keywords: Bacteria, mesophilic, human pathogen

description: Alistipes onderdonkii subsp. onderdonkii H3_19 is a mesophilic human pathogen that was isolated from human faeces.

NCBI tax id

  • NCBI tax id: 2706586
  • Matching level: subspecies

strain history

  • @ref: 64689
  • history: <- H. Browne, Wellcome Trust Sanger Institute, Hinxton, Cambridgeshire, United Kingdom; H3_19

doi: 10.13145/bacdive158110.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Bacteroidia
  • order: Bacteroidales
  • family: Rikenellaceae
  • genus: Alistipes
  • species: Alistipes onderdonkii subsp. onderdonkii
  • full scientific name: Alistipes onderdonkii subsp. onderdonkii (Song et al. 2006) Sakamoto et al. 2020

@ref: 64689

domain: Bacteria

phylum: Bacteroidetes

class: Bacteroidia

order: Bacteroidales

family: Rikenellaceae

genus: Alistipes

species: Alistipes onderdonkii subsp. onderdonkii

full scientific name: Alistipes onderdonkii subsp. onderdonkii (Song et al. 2006) Sakamoto et al. 2020

strain designation: H3_19

type strain: no

Culture and growth conditions

culture medium

  • @ref: 64689
  • name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1203a
  • composition: Name: FASTIDIOUS ANAEROBE BROTH (DSMZ Medium 1203a) Composition: Fastidious Anaerobe Basal Broth 35.4 g/l Distilled water

culture temp

  • @ref: 64689
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 64689
  • sample type: human faeces
  • geographic location: Cambridgeshire
  • country: United Kingdom
  • origin.country: GBR
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Gastrointestinal tract#Feces (Stool)

Safety information

risk assessment

  • @ref: 64689
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

External links

@ref: 64689

culture collection no.: DSM 108231

straininfo link

  • @ref: 110952
  • straininfo: 399592

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
64689Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-108231Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 108231)
110952Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID399592.1