Strain identifier

BacDive ID: 157970

Type strain: No

Species: Burkholderia sp.

Strain Designation: MAK1

Strain history: <- J. Stankeviciute, Institute of Biochemistry, Vilnius University, Lithuania; MAK 1 <- R. Gasparaviciute, Institute of Biochemistry, Vilnius University

NCBI tax ID(s): 36773 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 8.1 (current version)

General

@ref: 64542

BacDive-ID: 157970

DSM-Number: 102049

keywords: 16S sequence, Bacteria, mesophilic

description: Burkholderia sp. MAK1 is a mesophilic bacterium that was isolated from soil.

NCBI tax id

  • NCBI tax id: 36773
  • Matching level: species

strain history

  • @ref: 64542
  • history: <- J. Stankeviciute, Institute of Biochemistry, Vilnius University, Lithuania; MAK 1 <- R. Gasparaviciute, Institute of Biochemistry, Vilnius University

doi: 10.13145/bacdive157970.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia sp.
  • full scientific name: Burkholderia Yabuuchi et al. 1993

@ref: 64542

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia sp.

full scientific name: Burkholderia sp.

strain designation: MAK1

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
64542REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)yeshttps://mediadive.dsmz.de/medium/1aName: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
64542MINERAL MEDIUM WITH VITAMINS (DSMZ Medium 462)yeshttps://mediadive.dsmz.de/medium/462Name: MINERAL MEDIUM (BRUNNER) WITH VITAMINS (DSMZ Medium 462) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Casein peptone 15.0 g/l Peptone 5.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Meat extract 3.0 g/l Na2HPO4 2.44 g/l KH2PO4 1.52 g/l (NH4)2SO4 0.5 g/l MgSO4 x 7 H2O 0.2 g/l CaCl2 x 2 H2O 0.05 g/l EDTA 0.005 g/l FeSO4 x 7 H2O 0.002 g/l H3BO3 0.0003 g/l CoCl2 x 6 H2O 0.0002 g/l Pyridoxamine 0.000125 g/l ZnSO4 x 7 H2O 0.0001 g/l Nicotinic acid 5e-05 g/l Vitamin B12 5e-05 g/l Na2MoO4 x 2 H2O 3e-05 g/l MnCl2 x 4 H2O 3e-05 g/l p-Aminobenzoate 2.5e-05 g/l Thiamine-HCl x 2 H2O 2.5e-05 g/l NiCl2 x 6 H2O 2e-05 g/l Calcium pantothenate 1.25e-05 g/l CuCl2 x 2 H2O 1e-05 g/l Biotin 5e-06 g/l Distilled water

culture temp

  • @ref: 64542
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 64542
  • sample type: soil
  • geographic location: Vilnius
  • country: Lithuania
  • origin.country: LTU
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

taxonmaps

  • @ref: 69479
  • File name: preview.99_4747.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_12;96_18;97_211;98_236;99_4747&stattab=map
  • Last taxonomy: Burkholderia
  • 16S sequence: KU195413
  • Sequence Identity:
  • Total samples: 1110
  • soil counts: 704
  • aquatic counts: 101
  • animal counts: 95
  • plant counts: 210

Sequence information

16S sequences

  • @ref: 64542
  • description: Burkholderia sp. MAK1 16S ribosomal RNA gene, partial sequence
  • accession: KU195413
  • length: 1494
  • database: ena
  • NCBI tax ID: 1765374

External links

@ref: 64542

culture collection no.: DSM 102049

straininfo link

  • @ref: 110819
  • straininfo: 407520

literature

  • topic: Enzymology
  • Pubmed-ID: 27982075
  • title: Oxyfunctionalization of pyridine derivatives using whole cells of Burkholderia sp. MAK1.
  • authors: Stankeviciute J, Vaitekunas J, Petkevicius V, Gasparaviciute R, Tauraite D, Meskys R
  • journal: Sci Rep
  • DOI: 10.1038/srep39129
  • year: 2016
  • mesh: Burkholderia/*growth & development/isolation & purification, Hydroxylation, Molecular Structure, Pyridines/*chemistry, Soil Microbiology
  • topic2: Phylogeny

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
64542Curators of the DSMZhttps://www.dsmz.de/collection/catalogue/details/culture/DSM-102049Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 102049)
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.MicrobeAtlas 1.0 betahttps://microbeatlas.org/
110819Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID407520.1