Strain identifier
BacDive ID: 157676
Type strain: 
Species: Corynebacterium sp.
Strain history: <- F. CADORET; IHU Mediterranée Infection, Marseille Cedex 5, FRANCE; Marseille-P2417T<-S. BELLALI; IHU Méditerranée Infection
NCBI tax ID(s): 1720 (species)
version 8.1 (current version)
General
@ref: 64245
BacDive-ID: 157676
DSM-Number: 104935
keywords: 16S sequence, Bacteria, mesophilic
description: Corynebacterium sp. DSM 104935 is a mesophilic bacterium that was isolated from Stool sample.
NCBI tax id
- NCBI tax id: 1720
- Matching level: species
strain history
- @ref: 64245
- history: <- F. CADORET; IHU Mediterranée Infection, Marseille Cedex 5, FRANCE; Marseille-P2417T<-S. BELLALI; IHU Méditerranée Infection
doi: 10.13145/bacdive157676.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Corynebacteriaceae
- genus: Corynebacterium
- species: Corynebacterium sp.
- full scientific name: Corynebacterium Lehmann and Neumann 1896 (Approved Lists 1980)
synonyms
@ref synonym 20215 Caseobacter 20215 Turicella 20215 Bacterionema
@ref: 64245
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Burkholderiales
family: Corynebacteriaceae
genus: Corynebacterium
species: Corynebacterium sp.
full scientific name: Corynebacterium sp.
type strain: yes
Morphology
multimedia
- @ref: 64245
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_104935.jpg
- caption: Medium 535a 37°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 64245 | TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a) | yes | https://mediadive.dsmz.de/medium/535a | Name: TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a) Composition: None 50.0 g/l Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
| 64245 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
culture temp
- @ref: 64245
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 64245
- sample type: Stool sample
- geographic location: Marseille
- country: France
- origin.country: FRA
- continent: Europe
isolation source categories
- Cat1: #Host Body Product
- Cat2: #Gastrointestinal tract
- Cat3: #Feces (Stool)
taxonmaps
- @ref: 69479
- File name: preview.99_3936.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_10;96_1764;97_2112;98_2984;99_3936&stattab=map
- Last taxonomy: Corynebacterium pacaense subclade
- 16S sequence: LT223574
- Sequence Identity:
- Total samples: 3342
- soil counts: 693
- aquatic counts: 509
- animal counts: 2006
- plant counts: 134
Sequence information
16S sequences
- @ref: 64245
- description: Corynebacterium sp. Marseille-P2417 partial 16S rRNA gene, strain Marseille-P2417T
- accession: LT223574
- length: 1481
- database: ena
- NCBI tax ID: 1816684
External links
@ref: 64245
culture collection no.: DSM 104935, CSUR P2417, Marseille-P2417T
straininfo link
- @ref: 110545
- straininfo: 407867
literature
- topic: Phylogeny
- Pubmed-ID: 31641510
- title: Corynebacterium pacaense sp. nov., Alistipes megaguti sp. nov., Alistipes provencensis sp. nov., 3 new bacteria isolated from fresh human stool specimens.
- authors: Bellali S, Naud S, Ndongo S, Lo CI, Anani H, Raoult D, Lagier JC
- journal: New Microbes New Infect
- DOI: 10.1016/j.nmni.2019.100593
- year: 2019
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 64245 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-104935 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 104935) | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ | |
| 110545 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID407867.1 |