Strain identifier
BacDive ID: 157629
Type strain: 
Species: Bifidobacterium adolescentis
Strain Designation: ORG 4, ORG4
Strain history: <- P. Mattarelli; ORG4 <- M. Modesto, Dept. Agricul. Scs., Univ. Bologna, Italy <- M. R. D'Aimmo, Chalmers Univ. of Technol., Dept. of Chemical and Biological Eng., Gothenburg, Sweden
NCBI tax ID(s): 1680 (species)
version 8.1 (current version)
General
@ref: 64198
BacDive-ID: 157629
DSM-Number: 28529
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Bifidobacterium adolescentis ORG 4 is a mesophilic human pathogen that was isolated from orangutan faeces.
NCBI tax id
- NCBI tax id: 1680
- Matching level: species
strain history
- @ref: 64198
- history: <- P. Mattarelli; ORG4 <- M. Modesto, Dept. Agricul. Scs., Univ. Bologna, Italy <- M. R. D'Aimmo, Chalmers Univ. of Technol., Dept. of Chemical and Biological Eng., Gothenburg, Sweden
doi: 10.13145/bacdive157629.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Bifidobacteriales
- family: Bifidobacteriaceae
- genus: Bifidobacterium
- species: Bifidobacterium adolescentis
- full scientific name: Bifidobacterium adolescentis Reuter 1963 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Bifidobacterium stercoris
@ref: 64198
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Bifidobacteriales
family: Bifidobacteriaceae
genus: Bifidobacterium
species: Bifidobacterium adolescentis
full scientific name: Bifidobacterium adolescentis Reuter 1963 emend. Nouioui et al. 2018
strain designation: ORG 4, ORG4
type strain: no
Culture and growth conditions
culture medium
- @ref: 64198
- name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58)
- growth: yes
- link: https://mediadive.dsmz.de/medium/58
- composition: Name: BIFIDOBACTERIUM MEDIUM (DSMZ Medium 58) Composition: Glucose 10.0 g/l Casein peptone 10.0 g/l Bacto Soytone 5.0 g/l Meat extract 5.0 g/l Yeast extract 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l MnSO4 x H2O 0.05 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Tween 80 Resazurin Distilled water
culture temp
- @ref: 64198
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68371 | 17754 | glycerol | - | builds acid from |
| 68371 | 17113 | erythritol | - | builds acid from |
| 68371 | 17108 | D-arabinose | - | builds acid from |
| 68371 | 30849 | L-arabinose | + | builds acid from |
| 68371 | 16988 | D-ribose | + | builds acid from |
| 68371 | 65327 | D-xylose | + | builds acid from |
| 68371 | 65328 | L-xylose | - | builds acid from |
| 68371 | 15963 | ribitol | - | builds acid from |
| 68371 | 74863 | methyl beta-D-xylopyranoside | - | builds acid from |
| 68371 | 12936 | D-galactose | + | builds acid from |
| 68371 | 17634 | D-glucose | + | builds acid from |
| 68371 | 15824 | D-fructose | + | builds acid from |
| 68371 | 16024 | D-mannose | - | builds acid from |
| 68371 | 17266 | L-sorbose | - | builds acid from |
| 68371 | 62345 | L-rhamnose | - | builds acid from |
| 68371 | 16813 | galactitol | - | builds acid from |
| 68371 | 17268 | myo-inositol | - | builds acid from |
| 68371 | 16899 | D-mannitol | + | builds acid from |
| 68371 | 17924 | D-sorbitol | + | builds acid from |
| 68371 | 43943 | methyl alpha-D-mannoside | - | builds acid from |
| 68371 | 320061 | methyl alpha-D-glucopyranoside | + | builds acid from |
| 68371 | 59640 | N-acetylglucosamine | - | builds acid from |
| 68371 | 27613 | amygdalin | + | builds acid from |
| 68371 | 18305 | arbutin | + | builds acid from |
| 68371 | 4853 | esculin | + | builds acid from |
| 68371 | 17814 | salicin | + | builds acid from |
| 68371 | 17057 | cellobiose | + | builds acid from |
| 68371 | 17306 | maltose | + | builds acid from |
| 68371 | 17716 | lactose | + | builds acid from |
| 68371 | 28053 | melibiose | + | builds acid from |
| 68371 | 17992 | sucrose | + | builds acid from |
| 68371 | 27082 | trehalose | + | builds acid from |
| 68371 | 15443 | inulin | - | builds acid from |
| 68371 | 6731 | melezitose | - | builds acid from |
| 68371 | 16634 | raffinose | + | builds acid from |
| 68371 | 28017 | starch | + | builds acid from |
| 68371 | 28087 | glycogen | + | builds acid from |
| 68371 | 17151 | xylitol | - | builds acid from |
| 68371 | 28066 | gentiobiose | + | builds acid from |
| 68371 | 32528 | turanose | + | builds acid from |
| 68371 | 62318 | D-lyxose | - | builds acid from |
| 68371 | 16443 | D-tagatose | - | builds acid from |
| 68371 | 28847 | D-fucose | - | builds acid from |
| 68371 | 18287 | L-fucose | - | builds acid from |
| 68371 | 18333 | D-arabitol | - | builds acid from |
| 68371 | 18403 | L-arabitol | - | builds acid from |
| 68371 | 24265 | gluconate | - | builds acid from |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from |
API 50CHac
| @ref | Q | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64198 | - | - | - | - | + | + | + | - | - | - | + | + | + | - | - | - | - | - | + | + | - | + | - | + | + | + | + | + | + | + | + | + | + | - | - | + | + | + | - | + | + | - | - | - | - | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
- @ref: 64198
- sample type: orangutan faeces
- geographic location: Borås Djurpark
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
| #Host | #Mammals | #Primates |
Safety information
risk assessment
- @ref: 64198
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 64198
- description: Bifidobacterium adolescentis strain ORG4 16S ribosomal RNA gene, partial sequence
- accession: KF468644
- length: 849
- database: ena
- NCBI tax ID: 1680
External links
@ref: 64198
culture collection no.: DSM 28529
straininfo link
- @ref: 110498
- straininfo: 406870
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 64198 | Curators of the DSMZ | https://www.dsmz.de/collection/catalogue/details/culture/DSM-28529 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 28529) | |
| 68371 | Automatically annotated from API 50CH acid | |||
| 110498 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID406870.1 |