Strain identifier
version 8.1 (current version)
General
@ref: 63356
BacDive-ID: 156907
keywords: genome sequence, Bacteria, aerobe, mesophilic
description: Pseudomonas balearica CCUG 66667 is an aerobe, mesophilic bacterium that was isolated from Rhizosphaere,Spartina patens,oil refinery site.
NCBI tax id
- NCBI tax id: 74829
- Matching level: species
doi: 10.13145/bacdive156907.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Pseudomonadaceae
- genus: Pseudomonas
- species: Pseudomonas balearica
- full scientific name: Pseudomonas balearica Bennasar et al. 1996
synonyms
- @ref: 20215
- synonym: Stutzerimonas balearica
@ref: 63356
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Pseudomonadaceae
genus: Pseudomonas
species: Pseudomonas balearica
type strain: no
Culture and growth conditions
culture temp
- @ref: 63356
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 63356
- oxygen tolerance: aerobe
Isolation, sampling and environmental information
isolation
- @ref: 63356
- sample type: Rhizosphaere,Spartina patens,oil refinery site
- geographic location: NY/NJ Harbour
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Industrial | #Plant (Factory) |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Plant | #Rhizosphere |
Sequence information
Genome sequences
- @ref: 66792
- description: Pseudomonas balearica strain st101
- accession: 74829.9
- assembly level: wgs
- database: patric
- NCBI tax ID: 74829
Genome-based predictions
predictions
| trait | prediction | confidence | training_data |
|---|---|---|---|
| motile | yes | 90.734 | no |
| flagellated | yes | 84.126 | no |
| gram-positive | no | 98.893 | no |
| anaerobic | no | 98.449 | no |
| aerobic | yes | 89.4 | no |
| halophile | no | 74.784 | no |
| spore-forming | no | 95.772 | no |
| thermophile | no | 99.63 | yes |
| glucose-util | yes | 81.855 | no |
| glucose-ferment | no | 90.321 | no |
External links
@ref: 63356
culture collection no.: CCUG 66667
straininfo link
- @ref: 110066
- straininfo: 408678
literature
- topic: Genetics
- Pubmed-ID: 28385841
- title: Genome Sequences of Two Naphthalene-Degrading Strains of Pseudomonas balearica, Isolated from Polluted Marine Sediment and from an Oil Refinery Site.
- authors: Salva-Serra F, Jakobsson HE, Busquets A, Gomila M, Jaen-Luchoro D, Segui C, Aliaga-Lozano F, Garcia-Valdes E, Lalucat J, Moore ER, Bennasar-Figueras A
- journal: Genome Announc
- DOI: 10.1128/genomeA.00116-17
- year: 2017
- topic2: Phylogeny
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 63356 | Curators of the CCUG | https://www.ccug.se/strain?id=66667 | Culture Collection University of Gothenburg (CCUG) (CCUG 66667) | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
| 110066 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID408678.1 |