Strain identifier
BacDive ID: 156548
Type strain:
Species: Streptococcus pseudopneumoniae
NCBI tax ID(s): 257758 (species)
version 8.1 (current version)
General
@ref: 62868
BacDive-ID: 156548
keywords: genome sequence, Bacteria, microaerophile, mesophilic
description: Streptococcus pseudopneumoniae CCUG 62647 is a microaerophile, mesophilic bacterium that was isolated from Human pharynx,healthy adolescent.
NCBI tax id
- NCBI tax id: 257758
- Matching level: species
doi: 10.13145/bacdive156548.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Streptococcaceae
- genus: Streptococcus
- species: Streptococcus pseudopneumoniae
- full scientific name: Streptococcus pseudopneumoniae Arbique et al. 2005
@ref: 62868
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Streptococcaceae
genus: Streptococcus
species: Streptococcus pseudopneumoniae
type strain: no
Morphology
colony morphology
- @ref: 62868
- incubation period: 1 day
Culture and growth conditions
culture temp
- @ref: 62868
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 62868
- oxygen tolerance: microaerophile
Isolation, sampling and environmental information
isolation
- @ref: 62868
- sample type: Human pharynx,healthy adolescent
- sampling date: 2000
- geographic location: Aarhus
- country: Denmark
- origin.country: DNK
- continent: Europe
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body-Site | #Oral cavity and airways | #Throat |
Sequence information
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Streptococcus pseudopneumoniae CCUG 62647 | GCA_002014925 | scaffold | ncbi | 257758 |
66792 | Streptococcus pseudopneumoniae strain CCUG 62647 | 257758.50 | wgs | patric | 257758 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
flagellated | no | 96.058 | no |
gram-positive | yes | 93.802 | no |
anaerobic | no | 92.736 | yes |
aerobic | no | 96.647 | yes |
halophile | yes | 69.662 | no |
spore-forming | no | 92.108 | no |
glucose-util | yes | 87.693 | no |
thermophile | no | 99.391 | yes |
motile | no | 94.796 | no |
glucose-ferment | yes | 89.099 | no |
External links
@ref: 62868
culture collection no.: CCUG 62647
straininfo link
- @ref: 109767
- straininfo: 411217
Reference
@id | authors | title | doi/url | catalogue |
---|---|---|---|---|
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
62868 | Curators of the CCUG | https://www.ccug.se/strain?id=62647 | Culture Collection University of Gothenburg (CCUG) (CCUG 62647) | |
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | https://diaspora-project.de/progress.html#genomes | |
109767 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID411217.1 |