Strain identifier

BacDive ID: 15626

Type strain: No

Species: Streptomyces sp.

Strain Designation: I-532

Strain history: KCC S-0399 <-- IFO 12798 <-- SAJ <-- ISP 5031 <-- H. Nishimura I-523.

NCBI tax ID(s): 1931 (species)

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General

@ref: 9230

BacDive-ID: 15626

DSM-Number: 40031

keywords: 16S sequence, Bacteria, antibiotic compound production

description: Streptomyces sp. I-532 is a bacterium that produces antibiotic compounds and was isolated from Soil.

NCBI tax id

  • NCBI tax id: 1931
  • Matching level: species

strain history

@refhistory
9230<- E.B. Shirling, ISP (Streptomyces minoensis) <- H. Nishimura, SRL I-532
67770KCC S-0399 <-- IFO 12798 <-- SAJ <-- ISP 5031 <-- H. Nishimura I-523.

doi: 10.13145/bacdive15626.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces sp.
  • full scientific name: Streptomyces Waksman and Henrici 1943 (Approved Lists 1980)

  • synonyms

    @refsynonym
    20215Microechinospora
    20215Carbonactinospora
    20215Actinosporangium
    20215Actinopycnidium
    20215Elytrosporangium
    20215Streptoverticillium
    20215Chainia
    20215Indiella
    20215Actinacidiphila
    20215Kitasatoa
    20215Microellobosporia

@ref: 9230

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces sp.

full scientific name: Streptomyces sp.

strain designation: I-532

type strain: no

Culture and growth conditions

culture medium

  • @ref: 9230
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/65
  • composition: Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperature
9230positivegrowth28
67770positivegrowth28

Physiology and metabolism

compound production

  • @ref: 9230
  • compound: minomycin

metabolite production

  • @ref: 67770
  • Chebi-ID: 50694
  • metabolite: minomycin
  • production: yes

Isolation, sampling and environmental information

isolation

  • @ref: 67770
  • sample type: Soil
  • geographic location: Mino Park, Osaka Pref.
  • country: Japan
  • origin.country: JPN
  • continent: Asia

taxonmaps

  • @ref: 69479
  • File name: preview.99_43838.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15;96_102;97_109;98_1122;99_43838&stattab=map
  • Last taxonomy: Streptomyces
  • 16S sequence: AB184154
  • Sequence Identity:
  • Total samples: 329
  • soil counts: 201
  • aquatic counts: 10
  • animal counts: 10
  • plant counts: 108

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Streptomyces minoensis gene for 16S rRNA, partial sequence, strain: NBRC 12798AB1841541481nuccore67329
20218Streptomyces minoensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4399D44114120nuccore67329

External links

@ref: 9230

culture collection no.: DSM 40031, ATCC 19787, CBS 539.68, IFO 12798, ISP 5031, JCM 4399, NBRC 12798, RIA 1066, BCRC 13646, BCRC 13690, IFO 15797, KCTC 9114, NBRC 15797, NRRL B-5482, VKM Ac-744

straininfo link

  • @ref: 84712
  • straininfo: 37098

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9230Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 40031)https://www.dsmz.de/collection/catalogue/details/culture/DSM-40031
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
84712Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID37098.1StrainInfo: A central database for resolving microbial strain identifiers