Strain identifier
version 8.1 (current version)
General
@ref: 62260
BacDive-ID: 156067
keywords: Bacteria, microaerophile, mesophilic
description: Pasteurella dagmatis CCUG 60255 is a microaerophile, mesophilic bacterium that was isolated from Human wound,31-yr-old woman.
NCBI tax id
- NCBI tax id: 754
- Matching level: species
doi: 10.13145/bacdive156067.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pasteurellales
- family: Pasteurellaceae
- genus: Pasteurella
- species: Pasteurella dagmatis
- full scientific name: Pasteurella dagmatis Mutters et al. 1985
@ref: 62260
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pasteurellales
family: Pasteurellaceae
genus: Pasteurella
species: Pasteurella dagmatis
type strain: no
Culture and growth conditions
culture temp
- @ref: 62260
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 62260
- oxygen tolerance: microaerophile
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68377 | 17634 | D-glucose | + | builds acid from |
| 68377 | 15824 | D-fructose | + | builds acid from |
| 68377 | 17306 | maltose | + | builds acid from |
| 68377 | 17992 | sucrose | + | builds acid from |
| 68377 | 18257 | ornithine | - | degradation |
| 68377 | 16199 | urea | + | hydrolysis |
| 68377 | 27897 | tryptophan | + | energy source |
metabolite production
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- production: yes
metabolite tests
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- indole test: +
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68377 | tryptophan deaminase | + | 4.1.99.1 |
| 68377 | gamma-glutamyltransferase | - | 2.3.2.2 |
| 68377 | proline-arylamidase | - | 3.4.11.5 |
| 68377 | beta-galactosidase | - | 3.2.1.23 |
| 68377 | alkaline phosphatase | + | 3.1.3.1 |
| 68377 | lipase | - | |
| 68377 | urease | + | 3.5.1.5 |
| 68377 | ornithine decarboxylase | - | 4.1.1.17 |
| 68377 | beta-lactamase | - | 3.5.2.6 |
API NH
| @ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62260 | - | + | + | + | + | - | + | - | + | - | - | - | + |
Isolation, sampling and environmental information
isolation
- @ref: 62260
- sample type: Human wound,31-yr-old woman
- sampling date: 2010-09-01
- geographic location: Göteborg
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | #Female |
| #Host Body-Site | #Other | #Wound |
| #Infection | #Patient |
External links
@ref: 62260
culture collection no.: CCUG 60255
straininfo link
- @ref: 109385
- straininfo: 410636
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 62260 | Curators of the CCUG | https://www.ccug.se/strain?id=60255 | Culture Collection University of Gothenburg (CCUG) (CCUG 60255) | |
| 68377 | Automatically annotated from API NH | |||
| 109385 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | StrainInfo: A central database for resolving microbial strain identifiers | 10.60712/SI-ID410636.1 |