Strain identifier
BacDive ID: 155906
Type strain: 
Species: Peptoniphilus tyrrelliae
Strain history: K. L. Tyrrell RMA 19911.
NCBI tax ID(s): 755171 (species)
version 9.2 (current version)
General
@ref: 62038
BacDive-ID: 155906
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Peptoniphilus tyrrelliae CCUG 59621 is an anaerobe, mesophilic bacterium that was isolated from Human wound,leg.
NCBI tax id
- NCBI tax id: 755171
- Matching level: species
strain history
- @ref: 67770
- history: K. L. Tyrrell RMA 19911.
doi: 10.13145/bacdive155906.20241212.9.2
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Clostridia
- order: Eubacteriales
- family: Peptoniphilaceae
- genus: Peptoniphilus
- species: Peptoniphilus tyrrelliae
- full scientific name: Peptoniphilus tyrrelliae Citron et al. 2013
synonyms
- @ref: 20215
- synonym: Peptoniphilus senegalensis
@ref: 62038
domain: Bacteria
phylum: Firmicutes
class: Clostridia
order: Eubacteriales
family: Peptoniphilaceae
genus: Peptoniphilus
species: Peptoniphilus tyrrelliae
type strain: yes
Morphology
colony morphology
- @ref: 62038
- incubation period: 2 days
Culture and growth conditions
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 62038 | positive | growth | 37 |
| 67770 | positive | growth | 37 |
Physiology and metabolism
oxygen tolerance
- @ref: 62038
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
| @ref | sample type | sampling date | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|---|
| 62038 | Human wound,leg | 2004-03-01 | CA,Santa Monica | USA | USA | North America |
| 67770 | Human clinical specimen |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Human | |
| #Host Body-Site | #Other | #Wound |
| #Host Body-Site | #Limb | #Leg |
| #Infection | #Patient |
taxonmaps
- @ref: 69479
- File name: preview.99_3189.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15963;96_304;97_1989;98_2445;99_3189&stattab=map
- Last taxonomy: Peptoniphilus
- 16S sequence: GU938835
- Sequence Identity:
- Total samples: 4513
- soil counts: 11
- aquatic counts: 36
- animal counts: 4463
- plant counts: 3
Sequence information
16S sequences
- @ref: 67770
- description: Peptoniphilus tyrrelliae strain RMA 19911 16S ribosomal RNA gene, partial sequence
- accession: GU938835
- length: 1463
- database: nuccore
- NCBI tax ID: 755171
External links
@ref: 62038
culture collection no.: CCUG 59621, JCM 16893, ATCC BAA-2105, KCTC 15411
literature
- topic: Phylogeny
- Pubmed-ID: 22178538
- title: Peptoniphilus coxii sp. nov. and Peptoniphilus tyrrelliae sp. nov. isolated from human clinical infections.
- authors: Citron DM, Tyrrell KL, Goldstein EJ
- journal: Anaerobe
- DOI: 10.1016/j.anaerobe.2011.11.008
- year: 2011
- mesh: Anti-Bacterial Agents/pharmacology, Bacteria, Anaerobic/*classification/genetics/*isolation & purification, Bacterial Typing Techniques, Cluster Analysis, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Gram-Positive Bacteria/*classification/genetics/*isolation & purification, Gram-Positive Bacterial Infections/*microbiology, Humans, Microbial Sensitivity Tests, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Enzymology
Reference
| @id | authors | title | doi/url | catalogue |
|---|---|---|---|---|
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | 10.1099/ijsem.0.004332 | |
| 62038 | Curators of the CCUG | https://www.ccug.se/strain?id=59621 | Culture Collection University of Gothenburg (CCUG) (CCUG 59621) | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | MicrobeAtlas 1.0 beta | https://microbeatlas.org/ |