Strain identifier

BacDive ID: 155483

Type strain: No

Species: Capnocytophaga canimorsus

NCBI tax ID(s): 28188 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 8.1 (current version)

General

@ref: 61494

BacDive-ID: 155483

keywords: Bacteria, microaerophile, mesophilic

description: Capnocytophaga canimorsus CCUG 57842 is a microaerophile, mesophilic bacterium that was isolated from Human blood,54-yr-old man,dog bite,meningitis.

NCBI tax id

  • NCBI tax id: 28188
  • Matching level: species

doi: 10.13145/bacdive155483.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacteroidota
  • domain: Bacteria
  • phylum: Bacteroidota
  • class: Flavobacteriia
  • order: Flavobacteriales
  • family: Flavobacteriaceae
  • genus: Capnocytophaga
  • species: Capnocytophaga canimorsus
  • full scientific name: Capnocytophaga canimorsus Brenner et al. 1990

@ref: 61494

domain: Bacteria

phylum: Bacteroidetes

class: Flavobacteriia

order: Flavobacteriales

family: Flavobacteriaceae

genus: Capnocytophaga

species: Capnocytophaga canimorsus

type strain: no

Culture and growth conditions

culture temp

  • @ref: 61494
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 61494
  • oxygen tolerance: microaerophile

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase+3.2.1.23
68377alkaline phosphatase+3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68377beta-lactamase-3.5.2.6
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)-
68382esterase lipase (C 8)-
68382lipase (C 14)-
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin+3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase+3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

fatty acid profile

  • fatty acids

    @reffatty acidpercentageECL
    61494C14:02.514
    61494C16:04.216
    61494C18:01.718
    61494C13:0 iso1.512.612
    61494C13:1 at 12-130.912.931
    61494C15:0 ANTEISO2.914.711
    61494C15:0 ISO6314.621
    61494C15:0 ISO 3OH3.716.135
    61494C16:0 3OH4.517.52
    61494C17:0 iso 3OH5.118.161
    61494C18:1 ω9c3.417.769
    61494C18:2 ω6,9c/C18:0 ANTE5.217.724
    61494unknown 13.566113.566
    61494unknown 16.5800.516.58
  • type of FA analysis: whole cell analysis
  • method/protocol: CCUG

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
61494-+---++-+-++---+-+--

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
61494-+++----++---

Isolation, sampling and environmental information

isolation

  • @ref: 61494
  • sample type: Human blood,54-yr-old man,dog bite,meningitis
  • sampling date: 2009-03-01
  • geographic location: Västerås
  • country: Sweden
  • origin.country: SWE
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Human#Male
#Host Body Product#Fluids#Blood
#Infection#Disease#Meningitis
#Infection#Patient

External links

@ref: 61494

culture collection no.: CCUG 57842

straininfo link

  • @ref: 108913
  • straininfo: 411844

Reference

@idauthorstitledoi/urlcatalogue
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ10.1099/ijsem.0.004332
61494Curators of the CCUGhttps://www.ccug.se/strain?id=57842Culture Collection University of Gothenburg (CCUG) (CCUG 57842)
68377Automatically annotated from API NH
68382Automatically annotated from API zym
108913Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.StrainInfo: A central database for resolving microbial strain identifiers10.60712/SI-ID411844.1